| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0279 |
|---|
| Symbol | |
|---|
| ID | 8528641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 314090 |
|---|
| End bp | 314563 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_003257739 |
|---|
| Protein GI | 261819633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.936856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG ATCCCGTATT GCAACTCAGC ACCGTATTAC GTCCTGAGTG CACCCGAAGC
ACAGTCCATT GCCAGAGTAA AAAACGGGCA TTGGAAATTA TCAGCGAGCT GGCCGCCAAA
CAGCTTAACA TTCCCTCGCA GGTTATCTTT GATGCCATCC TGACCCGGGA GCGGATGGGC
AGCACGGGGA TCGGCGGCGG CATTGCCATT CCTCACGGTA AGCTGGAAGA CGATAATGCG
CTGGGTGCCA TCGGTGTTTT CATCCAGCTA GAGCAACCGA TCGCTTTCGA TGCAATTGAT
AATCAGGCCG TTGATCTGCT TTTTGCCTTG CTGGTTCCAG CGGAACAATG TAAAACCCAT
TTGCATACCC TGTCGCTTGT TGCCAAGCGG CTAGCGGATA AAACAGTTTG CCGACGTCTG
CGGGCGGCGC AAAGCGATGA AGAGCTATAC CAGATTATGA CGGAAGCGGA TTAA
|
|---|
| Protein sequence | MSHDPVLQLS TVLRPECTRS TVHCQSKKRA LEIISELAAK QLNIPSQVIF DAILTRERMG
STGIGGGIAI PHGKLEDDNA LGAIGVFIQL EQPIAFDAID NQAVDLLFAL LVPAEQCKTH
LHTLSLVAKR LADKTVCRRL RAAQSDEELY QIMTEAD
|
|---|
| |