Gene Pecwa_0249 details

Gene Information

• Locus tag: Pecwa_0249
• ID: 8528611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 281166
• End bp: 281924
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 57%
• Product: ABC transporter related protein
• Protein accession: YP_003257710
• Protein GI: 261819604

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGATA CCCGCATCGC CACGCTTCAG GCGGTTAGCG TCGGATATGG CCGCACCGTG 
GTGAATCGTG ACATCTCATT TTCACTGCCA TCCGGGCAGA TTACCTGCTT GCTGGGCGCG 
AATGGCAGCG GAAAAACTAC GCTGATGCGC ACCCTGCTGG GCTTGATTCC TGCCTTTTCC 
GGTCAGATAC ACATCGCCGA AAAACCCATT ACCGCGTGGT CTGCCAAGGC GCTCGCGAAT 
GTTGCGGCCT ATGTGCCTCA GGCGCATGAC TCCCCCTTTG CTTTCCGCGT GTTGGATATG 
GTGCTGATGG GATGTCATCC CCGGTTGTCG CTTTTTTCCA CACCGGGAAA GCGTGAAATC 
GCGTGTGCTG AAGCGGTGTT ATCCCAGCTT GGGATTCTGT CGTTGAGCCA GCGCTCATAC 
GCGACGCTGA GCGGTGGAGA GCGACAGCGC GTGCTCATTG CTCGCGCATT AGTACAACAA 
CCTTTGCTGA TGGTGATGGA TGAACCGGCA GCCAGTCTGG ATTTTGGCAA TCAGATTCGA 
TTATTGGCAC ACATCAAACG GCTTAAAGAA AACGGTATTG CGGTGCTGAT GTCCACACAC 
CATCCCCAGC ATGCGCGAGC TGTGGCGGAT AACGTGGTCT TGCTGCACCC CGGGGCGGGT 
ACGGAACAAG GAAGCCCGGA CGTGCTGCTG GCACCCGCGA GGCTCGCGGC GCTGTATGGC 
GTCAAAGAAG CGGATATACA CGCCCATTTC CGTACCTGA 

 

Protein sequence

MMDTRIATLQ AVSVGYGRTV VNRDISFSLP SGQITCLLGA NGSGKTTLMR TLLGLIPAFS 
GQIHIAEKPI TAWSAKALAN VAAYVPQAHD SPFAFRVLDM VLMGCHPRLS LFSTPGKREI 
ACAEAVLSQL GILSLSQRSY ATLSGGERQR VLIARALVQQ PLLMVMDEPA ASLDFGNQIR 
LLAHIKRLKE NGIAVLMSTH HPQHARAVAD NVVLLHPGAG TEQGSPDVLL APARLAALYG 
VKEADIHAHF RT