Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0247 |
Symbol | |
ID | 8528609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 279140 |
End bp | 280177 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_003257708 |
Protein GI | 261819602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.779854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATGA ACAGACGGAC TTTCTTGTCG TATTTGGCGA CACTTTCTGC ATTGTCTTTC TTACCTGCTT CTTTTGCGCA TGCGTTTGAC CGAATTGCTG GGCGGTTTGG CCAGATTCCT GAACCTTCTG ATATTCAGCG TGTGATCAGC GCAGGGCCTC CTGCTGATCT GCTGCTACTG GCGTTGGCAC CGGAAAAGCT GCTGGGTTTT TCATCATTCG ATTTGTCGGG TGAGTCGGGG GCATTATTTT CTGAAACTGT CCGTCGATTG CCACGCTTGG GGCGCTTATC AGGCCGAGCG AGTACGTTAT CGCTGGAAAA GCTGCTGACG CTGAACCCCG ATATCATTAT TGATTGCGGA AGTGCCGATG AAACGTATCG CTCACTGGCG CAGAGAACCT CGCAGCAGAC CGGCGTGCCT TACGTGCTGG TGGATGGCGG CCTTCAGGAT ACGCCTTCAC AGCTCCGGCA GGTGGGGCAG CTATTGAATG TCACGACGCG GGCAGAGCAG CAGGCACAGT TTGCTGAGGC TATTTTACAA CGAGCCAATG CTTACCGTAC CAGCGCACAA ACCGAGAAAC CGCGTTTTTA TTTTGCTCGT GGGGCGATGG GGCTGGAAAC GGGATTGCGT GGCTCGCTTC ATACCGAAGC GGTAGAGCTG TTGGGTTTTG ATAACGTCGC GACCGCTGGA GAATTAAACA CGCTGACTCA GGTGTCGATG GAGCACATTC TGACGTGGAA CCCGGACCTT ATCATCACGC AGGATGTGCA GAGTTATCAG CACATTACAC ATTCCGCGCA ATGGCAAGGT GTAGATGCGG TGGCACAGCA GCGCGTTATC CTGATGTCCG GTCTGCCGTT TGGCTGGCTG GATGCGCCGC CTGGTCTAAA TCGGCTGCTG GGGCTGTGTC GTTTACAAAG CCATTTTGAC CCTGCCGCAG CCCAGCAACT TAAAAGCGAT ACCCGAGCGT TTTTCCGCCT GTTTTACCAT ACCGATCTCA ATGATGAGCA GCTTGAACAC CTGCTGAGAG TGGCATGA
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Protein sequence | MGMNRRTFLS YLATLSALSF LPASFAHAFD RIAGRFGQIP EPSDIQRVIS AGPPADLLLL ALAPEKLLGF SSFDLSGESG ALFSETVRRL PRLGRLSGRA STLSLEKLLT LNPDIIIDCG SADETYRSLA QRTSQQTGVP YVLVDGGLQD TPSQLRQVGQ LLNVTTRAEQ QAQFAEAILQ RANAYRTSAQ TEKPRFYFAR GAMGLETGLR GSLHTEAVEL LGFDNVATAG ELNTLTQVSM EHILTWNPDL IITQDVQSYQ HITHSAQWQG VDAVAQQRVI LMSGLPFGWL DAPPGLNRLL GLCRLQSHFD PAAAQQLKSD TRAFFRLFYH TDLNDEQLEH LLRVA
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