Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0230 |
Symbol | |
ID | 8528592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 263184 |
End bp | 263945 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003257692 |
Protein GI | 261819586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.653614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGA CTGCATTAAC TCAATCAACC GATCACATGA TTACCTTAGA GAATGTGAAT AAGTGGTACG GACACTTTCA TGTACTGAAA GACATCAATT TGCAGGTCAG ACAGGGGGAA AGAATTGTCT TGTGCGGTCC TTCAGGCTCA GGTAAATCAA CGACAATACG CTGCATTAAT CATCTTGAAG AACATCAGCA GGGGCGGATT GTTGTTGATG GTATTGAATT GAATAACGAT TTACGCAACA TCGAAAAAGT TCGTACTGAA GTTGGCATGG TGTTTCAGCA CTTCAATCTT TTCCCGCACT TAACCGTATT GCAGAACTGC ACACTAGCAC CATGCTGGGT TAGGCACATG CCGAAGAAAG AAGCGGAAGA ACTGGCCATG CACTATTTGG AACGAGTACG CATCGCAGCA CATGCCCATA AATTTCCGGG ACAGCTATCT GGAGGCCAAC AGCAGCGCGT GGCAATCGCA CGGTCGCTGT GCATGAAGCC TAAAATTATG TTGTTCGACG AACCAACGTC CGCACTAGAC CCTGAGATGG TGAAAGAAGT GCTGGATACT ATGCTGGGAC TGGCACAAGA TGGAATGACG ATGCTGTGTG TAACGCACGA AATGGGGTTC GCAAAAACTG TAGCTGACAG AGTGATCTTT ATGGATCAGG GAGAGATCGT AGAACAAGCA CCACCGGATA TCTTCTTTTC TAGCCCTCGC TCAGAACGCA CGCAGTCATT TCTTTCACAA ATCCTGCACT AA
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Protein sequence | MNQTALTQST DHMITLENVN KWYGHFHVLK DINLQVRQGE RIVLCGPSGS GKSTTIRCIN HLEEHQQGRI VVDGIELNND LRNIEKVRTE VGMVFQHFNL FPHLTVLQNC TLAPCWVRHM PKKEAEELAM HYLERVRIAA HAHKFPGQLS GGQQQRVAIA RSLCMKPKIM LFDEPTSALD PEMVKEVLDT MLGLAQDGMT MLCVTHEMGF AKTVADRVIF MDQGEIVEQA PPDIFFSSPR SERTQSFLSQ ILH
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