| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0212 |
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| Symbol | |
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| ID | 8528570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 239529 |
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| End bp | 240926 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | shikimate transporter |
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| Protein accession | YP_003257674 |
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| Protein GI | 261819568 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCT CAACTACGCC AACTCTCTCA CAACCTGGCG GCTCTTTACC CCATCAGGAT
GACTCTCTTC CCTCTGATAA AACCCTACAA ACACAGTTAG AAAGCCATTC TCAACATCGA
GCGAAACGCG CAGCATGGGG CAGTTTTGTG GGTGCGGTTG TTGATTGGTA CGATTTCTTG
CTGTACGGAA TTGTTGCCGC TCTGGTATTT AATACCGAAT TTTTTCCGCA GGTCAGCCCG
ACGATGGGGA CGTTGGCGGC ATTTGGTACG TTCGGTGTGG GTTTCCTGTT TCGCCCGTTA
GGCGGTATGG TATTCGGTCA CTTTGGTGAC AAGCTGGGCC GTAAACGGAT GTTGATGATT
ACGGTCTGGA TGATGGGTAT TTCCACTGCA TTGATTGGAC TGTTGCCGTC GTTTGATTCC
ATTGGTTGGT GGGCGCCGGT GCTGTTGGTT ATGCTGAGAG CCATTCAGGG TTTTGCGGTC
GGTGGCGAAT GGGGCGGGGC GGCACTGTTG GCGGTAGAGA GCGCACCGAA GAAAAAGAAA
GCTTTTTACA GCAGTGGCGT ACAGGTTGGT TTTGGTGTGG GCCTGTTACT GGCAACCGGT
TCGGTCTCGG TGGTCAGCAA TTTGACCACC AATGAAGAAT TTACCAACTG GGGTTGGCGT
TTGCCGTTCT TATTCAGCCT GATTTTGGTT GCTATCGCCT GGTGGGTACG TAACGGGATG
GATGAGTCTC AGGAATTTGA GGCGAATAAA ACTCTGGGTG ATAGAGCAAA AAAACTGCGT
TCGTTCCCGA TTATGGACGC ACTGCGCCAG CATCCTAAAG CCTTCCTACT GATTATTGCG
TTACGGCTTG GTGAACTGTT GACGATGTAT ATCGTCACCG CATTTGCACT CAATTACTCC
ACCACCCACC TTGGCTTGTC GCGGGATATC TTTCTGAATA TTGGACTGCT GGTGGGGGCG
ATCAGTTGCG TGTCCATCCC TTTCTTTGCT TATCTGGCGG ATAGCTTTGG CCGCCGTCGC
ATCTATGTGA CTGGTGCGTT GATTGGAGCG GTGAGTGCCG TGCCATTCTT TATGGCGTTG
GAAAGCCATA ACACGCTGAT GATTCTGTTC TTTGCCATCA TGCTGGCGAA TGCTGCTCAC
GATATGATCG TTAGCGTACA GCAACCGATG TTTACCGAGC TATTTGGTAC GGCGTATCGC
TATAGCGGGG CTGGCGTGGG TTATCAGGTT GCCAGCGTGG TCGGCGGCGG GTTTACGCCT
TTTATCGCTG TTCTGCTGGT GGAATTCATG GATGGCTCAT GGCACGCGGT GGCGGCCTAC
CTTGCCATCG GCTGCTTACT GTCTGCGATT GTCGGGATGC AGATGAAAGC AAAATCGGCG
GATGACTTAC CTCGTTGA
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| Protein sequence | MDTSTTPTLS QPGGSLPHQD DSLPSDKTLQ TQLESHSQHR AKRAAWGSFV GAVVDWYDFL
LYGIVAALVF NTEFFPQVSP TMGTLAAFGT FGVGFLFRPL GGMVFGHFGD KLGRKRMLMI
TVWMMGISTA LIGLLPSFDS IGWWAPVLLV MLRAIQGFAV GGEWGGAALL AVESAPKKKK
AFYSSGVQVG FGVGLLLATG SVSVVSNLTT NEEFTNWGWR LPFLFSLILV AIAWWVRNGM
DESQEFEANK TLGDRAKKLR SFPIMDALRQ HPKAFLLIIA LRLGELLTMY IVTAFALNYS
TTHLGLSRDI FLNIGLLVGA ISCVSIPFFA YLADSFGRRR IYVTGALIGA VSAVPFFMAL
ESHNTLMILF FAIMLANAAH DMIVSVQQPM FTELFGTAYR YSGAGVGYQV ASVVGGGFTP
FIAVLLVEFM DGSWHAVAAY LAIGCLLSAI VGMQMKAKSA DDLPR
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