| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0211 |
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| Symbol | |
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| ID | 8528569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 234981 |
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| End bp | 239204 |
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| Gene Length | 4224 bp |
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| Protein Length | 1407 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003257673 |
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| Protein GI | 261819567 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGACT TATTAAAGTT TCTGAAAGCG CAAACTAAAA CCGAAGAGTT TGATGCGATC
AAAATTGCTC TGGCTTCGCC AGACATGATC CGTTCGTGGT CTTTTGGTGA AGTTAAAAAG
CCAGAAACCA TCAACTACCG TACGTTCAAG CCTGAACGTG ACGGCCTTTT CTGCGCCCGT
ATCTTTGGGC CAGTAAAAGA TTATGAGTGC TTGTGCGGTA AGTATAAGCG CCTGAAACAC
CGTGGTGTTA TTTGTGAGAA GTGCGGCGTT GAAGTAACCC AAACTAAAGT ACGTCGTGAG
CGTATGGGTC ACATCGAGCT GGCTTCTCCG ACTGCGCACA TCTGGTTCCT GAAGTCACTG
CCTTCCCGTA TCGGTTTGCT GTTAGATATG CCGCTGCGTG ATATTGAGCG TGTGCTTTAT
TTTGAATCTT ATGTCGTTGT TGAAGGTGGC ATGACCAACC TTGAGCGCCG TCAGATCCTG
ACTGAAGAGC AGTATCTGGA TGCGCTGGAA GAGTTCGGAG ATGAATTCGA CGCGAAAATG
GGTGCCGAAG CGATCCAGGC TCTGCTGAAG AACATGGATC TGGAGCAGGA ATGCGAGCAA
CTGCGTGAAG AGCTGACCGA AACCAACTCC GAAACCAAAC GTAAAAAGTT GACCAAACGC
ATTAAGCTGC TGGAAGCGTT CGTACAGTCT GGTAACAAGC CAGAGTGGAT GATTCTGACC
GTTCTGCCGG TACTGCCGCC AGATCTGCGT CCGTTGGTTC CGCTGGATGG TGGTCGTTTT
GCGACTTCTG ACCTGAACGA TTTGTATCGC CGCGTGATCA ACCGTAACAA CCGTCTGAAA
CGCCTGCTGG ATCTGGCTGC GCCAGACATC ATCGTACGTA ACGAAAAACG TATGTTGCAG
GAAGCGGTTG ATGCGCTGTT GGATAACGGC CGTCGCGGTC GTGCGATCAC CGGTTCTAAC
AAACGTCCTC TGAAGTCTTT GGCCGATATG ATCAAAGGTA AACAGGGTCG TTTCCGTCAG
AACTTGCTCG GTAAGCGTGT TGACTACTCC GGTCGTTCCG TAATCACCGT TGGTCCATAC
CTGCGTCTGC ACCAGTGTGG TCTGCCGAAG AAAATGGCAC TGGAACTGTT CAAACCGTTC
ATCTATGGCA AGCTGGAACT GCGTGGTCTT GCAACCACCA TTAAAGCCGC CAAGAAAATG
GTTGAGCGTG AAGAGGCCGT CGTATGGGAT ATCCTGGACG AAGTCATCCG CGAACACCCA
GTACTGCTGA ACCGTGCACC AACACTGCAC CGTTTGGGTA TCCAGGCATT TGAACCGGTA
CTGATCGAAG GTAAAGCGAT CCAGTTGCAC CCACTGGTTT GTGCGGCATA TAACGCCGAC
TTCGATGGTG ACCAGATGGC TGTACACGTA CCGTTGACGC TGGAAGCCCA GTTAGAAGCG
CGTGCGTTGA TGATGTCGAC CAACAACATC CTGTCCCCTG CTAATGGTGA GCCAATCATC
GTTCCTTCTC AGGACGTGGT ATTGGGTCTG TATTACATGA CGCGTGACTG TGTTAACGCC
AAAGGCGAAG GCATGGTGCT CACGGGTCCG AAAGAAGCTG AACGCGTTTA TCGTGCCGGC
CTGGCCTCTC TGCATGCGCG CGTTAAAGTG CGTATCACAG AAGAGATCAA GAGCATCGAA
GGCGATGTTA CGCATCAGAC GTCGATTATC GATACGACGA TCGGCCGTGC CATCCTGTGG
ATGATCGTAC CGAAAGGTCT GCCGTACTCG ATCGTTAACC AGCCTCTGGG CAAGAAAGCG
ATCTCCAAAA TGCTGAACAC CTGTTACCGC ATTTTGGGTC TGAAGCCGAC GGTTATCTTC
GCTGACCAGA CTATGTACAC CGGTTTTGCT TACGCGGCGC GCTCTGGTGC TTCCGTAGGT
ATCGATGACA TGGTTATCCC GGAGAAAAAA GCCGAGATTA TCGAAGAAGC AGAAACCGAA
GTTGCCGAGA TTCAGGAGCA GTTCCAATCT GGTCTGGTTA CCGCGGGCGA ACGCTATAAC
AAAGTGATCG ATATCTGGGC TGCGGCGAAC GAGCGTGTTG CGAAAGCGAT GATGGAAAAC
CTGTCCGTTG AGGATGTGGT TAACCGTGAT GGCGTAGTTG AGCAGCAGGT TTCTTTCAAC
AGCATCTTTA TGATGGCCGA CTCCGGTGCG CGTGGTTCTG CGGCACAGAT TCGTCAGTTG
GCGGGTATGC GTGGTCTGAT GGCGAAACCA GATGGTTCCA TCATCGAGAC GCCGATCACC
GCAAACTTCC GTGAAGGTTT GAACGTACTC CAGTACTTCA TCTCAACGCA CGGTGCGCGT
AAAGGTCTGG CGGATACCGC ACTGAAAACG GCAAACTCCG GTTACTTGAC GCGTCGTCTG
GTTGACGTTG CGCAGGATCT GGTTGTGACC GAAGACGATT GTGGTACCCA TGAAGGTATC
ATGATGACGC CGGTTATCGA GGGTGGTGAT GTTAAAGAGC CACTGCGTGA GCGCGTACTG
GGTCGTGTAA CGGCTGAAGA CGTGATCAAA CCGGGCACCG CGGATATTCT GGTTCCACGT
AACACGCTGC TGAACGAGCA GTGGTGTGAC ATGTTGGAAG AGAACTCCGT TGACGCCGTT
AAAGTACGTT CAGTGGTAAG TTGCGAAACC GACTTTGGCG TGTGTGCCAA TTGCTACGGT
CGCGATCTGG CTCGTGGTCA TATCATCAAC AAAGGTGAGG CTATCGGGGT TATCGCGGCA
CAGTCCATCG GTGAGCCAGG TACACAGTTA ACCATGCGTA CGTTCCACAT CGGTGGTGCG
GCATCGCGTG CGGCTGCTGA GTCCAGCATT CAGGTGAAAA ACAAAGGTAG CCTGAAACTG
AGCAACGCGA AGTTCGTAAT GAACAGCAAC GGTAAATTGG TTATTACTTC ACGTAATACT
GAACTGAAGC TGATCGACGA ATTCGGACGT ACTAAAGAAA GCTATAAAGT GCCTTACGGT
GCGGTGATGG CGAAGGGTGA CGGCTCAGAA GTTAGCGGTG GCGAAACCGT CGCAAACTGG
GATCCGCATA CCATGCCAGT GGTGACCGAA GTGAGCGGTT TCATCCGCTT TGCTGACATG
ATTGACGGTC AGACCATTAC TCGCCAGACC GACGAACTGA CTGGTTTGTC TTCTATCGTC
GTTCTGGATA GCGCAGAGCG TACTGGTAGC GGTAAAGACT TGCGTCCAGC ACTGAAAATC
GTTGACGGCA AAGGTGAGGA TGTACTGATC CCAGGTACTG ATATGCCTGC TCAATACTTC
CTGCCAGGTA AAACGATTGT TCAGTTGGAA GATGGAGTGC AGATTGGTGC CGGTGATACA
TTGGCGCGTC TCCCTCAGGA ATCCAGTGGT ACCAAGGATA TTACCGGTGG TCTGCCACGC
GTAGCCGACC TGTTTGAAGC ACGCCGTCCG AAAGAGCCGG CAATTCTGGC AGAGATCAGC
GGCATCATTT CCTTCGGTAA AGAAACCAAA GGCAAGCGCC GTTTGGTAAT TTCTCCGTTG
GATGGTAGTG ATGCTTACGA AGAGATGATT CCGAAATGGC GTCAGCTCAA CGTGTTCGAA
GGTGAAGTTG TTGAGCGTGG TGACGTTGTT TCCGACGGCC CAGAGTCTCC GCACGATATC
CTGCGTCTGC GTGGCGTACA TGCAGTAACG CGTTATATCA CCAACGAAGT TCAGGAAGTT
TACCGTCTGC AAGGCGTTAA GATTAACGAT AAACACATCG AAGTTATCGT TCGTCAGATG
TTGCGTAAAG GCACCATCGT TAGCGCGGGT AGCACGGAGT TCCTGGAAGG CGAACAGGCA
GAAGTGTCTC GTATCAAGAT TGCCAACCGT CAGTTGGAAG CGGATGGCAA GATCACGGCA
ACGTACAGCC GCGATCTGCT GGGTATCACC AAAGCATCTC TGGCGACCGA GTCCTTCATT
TCTGCGGCAT CGTTCCAGGA AACCACTCGC GTACTTACCG AAGCCGCTGT TGCGGGTAAA
CGTGATGAAC TGCGTGGCCT GAAAGAGAAC GTTATCGTAG GTCGTCTGAT CCCAGCAGGT
ACGGGTTATG CGTACCATCA GGATCGTATG CGCCGCCGTC AGGCAGGCGA AGCGCCTGTC
GTGCCTCAAG TGAGTGCCGA TGAAGCTTCT GCTAACTTGG CCGAACTGCT GAATGCAGGC
TTTGGTAGCA GCGACGACGA GTAA
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| Protein sequence | MKDLLKFLKA QTKTEEFDAI KIALASPDMI RSWSFGEVKK PETINYRTFK PERDGLFCAR
IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP TAHIWFLKSL
PSRIGLLLDM PLRDIERVLY FESYVVVEGG MTNLERRQIL TEEQYLDALE EFGDEFDAKM
GAEAIQALLK NMDLEQECEQ LREELTETNS ETKRKKLTKR IKLLEAFVQS GNKPEWMILT
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
EAVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPY
LRLHQCGLPK KMALELFKPF IYGKLELRGL ATTIKAAKKM VEREEAVVWD ILDEVIREHP
VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
RALMMSTNNI LSPANGEPII VPSQDVVLGL YYMTRDCVNA KGEGMVLTGP KEAERVYRAG
LASLHARVKV RITEEIKSIE GDVTHQTSII DTTIGRAILW MIVPKGLPYS IVNQPLGKKA
ISKMLNTCYR ILGLKPTVIF ADQTMYTGFA YAARSGASVG IDDMVIPEKK AEIIEEAETE
VAEIQEQFQS GLVTAGERYN KVIDIWAAAN ERVAKAMMEN LSVEDVVNRD GVVEQQVSFN
SIFMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVVT EDDCGTHEGI MMTPVIEGGD VKEPLRERVL
GRVTAEDVIK PGTADILVPR NTLLNEQWCD MLEENSVDAV KVRSVVSCET DFGVCANCYG
RDLARGHIIN KGEAIGVIAA QSIGEPGTQL TMRTFHIGGA ASRAAAESSI QVKNKGSLKL
SNAKFVMNSN GKLVITSRNT ELKLIDEFGR TKESYKVPYG AVMAKGDGSE VSGGETVANW
DPHTMPVVTE VSGFIRFADM IDGQTITRQT DELTGLSSIV VLDSAERTGS GKDLRPALKI
VDGKGEDVLI PGTDMPAQYF LPGKTIVQLE DGVQIGAGDT LARLPQESSG TKDITGGLPR
VADLFEARRP KEPAILAEIS GIISFGKETK GKRRLVISPL DGSDAYEEMI PKWRQLNVFE
GEVVERGDVV SDGPESPHDI LRLRGVHAVT RYITNEVQEV YRLQGVKIND KHIEVIVRQM
LRKGTIVSAG STEFLEGEQA EVSRIKIANR QLEADGKITA TYSRDLLGIT KASLATESFI
SAASFQETTR VLTEAAVAGK RDELRGLKEN VIVGRLIPAG TGYAYHQDRM RRRQAGEAPV
VPQVSADEAS ANLAELLNAG FGSSDDE
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