| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0182 |
|---|
| Symbol | |
|---|
| ID | 8528532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 194700 |
|---|
| End bp | 195743 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | DNA-binding transcriptional regulator CytR |
|---|
| Protein accession | YP_003257644 |
|---|
| Protein GI | 261819538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCAGA AGAAAGTCGT TACCACGGCG ACGATGAAAG ACGTGGCGGA TGAGGCCGGC
GTTTCCACCG CCACCGTATC CCGAACGTTA ATGAACCCAG ATAAAGTCTC TGCGACCACC
CGCAGGAAGG TCGAGCAGGC TGTCATCGCC GTTGGCTATT CGCCTCACGC ACTCAACCGA
AACCTCAAGC GTAATGAATC ACGCACGATC CTGACGATCG TGCCAGACAT CTGCGATCCC
TATTTCTCCG AAATATTTCG TGGGATAGAG GAAACGGCTG CCGAACACGG TTATCTGGTG
TTGATTGGCG ATTGCGCTCA CCAACATCAA AGGGAAAAAA CCTTCGTCGA TCTGATTATT
ACCAAACAGA TCGACGGCAT GGTGTTGCTC GGCTCCAATC TGCCATTTGA CGCAGGCCAG
GAAGAGCAGC GCAATCTGCC ACCGATGGTG ATGGCGAATG AGTTCTCACC GGACCTGGCA
TTGCCAACCG TGCATATCGA TAACCTGACC GCCGCCTTTG AAGCCGTACA TTATCTGCAT
CAGGCAGGCC ACCAGCGCAT CGCCTGCATT GCCGGCCCGG AGCACATGCA TCTGAGCCAA
TATCGCTTGC AGGGGTACAT TCAGGCTCTG CGCCGTAATG GCATTCTTAT CGATAACCAA
TACATCTTTC AGGGTGATTT CACCTATGAA ACGGGGATCA ACGGCCTGGT TGCGCTGATG
CAGCATCCGC AACCGCCCAG CGCCATCTTC TGTCATAGCG ATCTCATGGC GCTGGGCGTG
CTGGCGCAGG CCAGAAAAAT GGGGCTGGAC ATCCCGCGCG ATCTCTCCGT TATTGGCTTC
GACGATATCG AACAGGCGCA GTACTGCTGG CCTTCCCTCA CTTCTGTCGC TCAACCACGT
TATCAGATCG GGCGCGAGGC AATGCTGCTA CTCTTAGAGC AGTTGCAAGG TAATACGGTA
CAAAGCGGCT CTCGCCTGTT GTCCAGCGAA CTGGTCATAC GCGATAGTGT CGCCGCACCG
AATTACGCCC GTAACAGGCT TTAA
|
|---|
| Protein sequence | MKQKKVVTTA TMKDVADEAG VSTATVSRTL MNPDKVSATT RRKVEQAVIA VGYSPHALNR
NLKRNESRTI LTIVPDICDP YFSEIFRGIE ETAAEHGYLV LIGDCAHQHQ REKTFVDLII
TKQIDGMVLL GSNLPFDAGQ EEQRNLPPMV MANEFSPDLA LPTVHIDNLT AAFEAVHYLH
QAGHQRIACI AGPEHMHLSQ YRLQGYIQAL RRNGILIDNQ YIFQGDFTYE TGINGLVALM
QHPQPPSAIF CHSDLMALGV LAQARKMGLD IPRDLSVIGF DDIEQAQYCW PSLTSVAQPR
YQIGREAMLL LLEQLQGNTV QSGSRLLSSE LVIRDSVAAP NYARNRL
|
|---|
| |