Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0175 |
Symbol | |
ID | 8528525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 188377 |
End bp | 189216 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | MIP family channel protein |
Protein accession | YP_003257637 |
Protein GI | 261819531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.487645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAG CAGAACGTTC AACGCTAAAA GGCCAGTGTA TCGCCGAATT TCTCGGCACT GGCCTGCTGA TTTTCTTCGG TGTCGGCTGC GTCGCCGCGT TAAAACTGGC GGGAGCCAGC TTCGGACAGT GGGAAATCAG CATCATTTGG GGTCTGGGGG TTGCGATGGC AATCTACCTG ACCGCCGCCA TTTCCGGCGC TCACCTCAAC CCGGCCGTCA CTATCGCCCT GTGGCTGTTT GCCTGTTTCG ATGGACGCAA GGTTGTGCCT TACATTGTGG CGCAGATTGC AGGGGCATTT TGTGCCGCCG CACTGGTCTA CGGTCTGTAT TACAACCTGT TTGTGGATTT TGAACAAACT AACAATATGG TACGCGGCAG CACAGAAAGC CTGAATTTAG CAGGCATTTT CTCAACCTAC CCGAACCCGC ACATTTCCGT GATGCAGGCG CTGCTGGTTG AGACCGTCAT CACCGCGATT CTGATGTGCC TGATTCTGGC GCTGACTGAC GATGGTAACG GCATCCCACG CGGGCCACTC GCTCCTCTGC TGATCGGTAT TCTGATTGCG GTCATCGGTG CTTCTATGGG GCCGCTGACT GGCTTCGCCC TCAATCCGGC GCGTGACTTT GGTCCTAAAC TGTTCGCGTT CCTCGCGGGC TGGGGCGACG TTGCCTTTAC TGGCGCACGC GAAATCCCTT ACTTCCTGGT TCCTATCTTT GGCCCCATCA TCGGTGCCTG TCTGGGTGCC TTCGGTTATC GCGCACTGAT TGGCCGTAAT CTGCCATGCG ATGTGTGTGA ACCCGAGGCA GAAGCTACCA CGCGTCGTGA AAGCCGTTAA
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Protein sequence | MSQAERSTLK GQCIAEFLGT GLLIFFGVGC VAALKLAGAS FGQWEISIIW GLGVAMAIYL TAAISGAHLN PAVTIALWLF ACFDGRKVVP YIVAQIAGAF CAAALVYGLY YNLFVDFEQT NNMVRGSTES LNLAGIFSTY PNPHISVMQA LLVETVITAI LMCLILALTD DGNGIPRGPL APLLIGILIA VIGASMGPLT GFALNPARDF GPKLFAFLAG WGDVAFTGAR EIPYFLVPIF GPIIGACLGA FGYRALIGRN LPCDVCEPEA EATTRRESR
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