Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0127 |
Symbol | cpxA |
ID | 8528477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 146194 |
End bp | 147564 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | two-component sensor protein |
Protein accession | YP_003257602 |
Protein GI | 261819496 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.581229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAATA GTTTGACCGC CCGTATCTTT GCCATTTTTT GGTTAACGCT GGCGCTGGTA CTCATGCTGG TTCTGATGGT GCCCAAGCTG GACTCGCGCC AGCTTACCGC CTTGCTGGAA AATGAGCAGC GGCAGGGCAT CATGCTGGAA CAGCACATTG AAGCAGACCT CGCCAACACG CCTGCCAACG ATCTGCGCTG GTGGCTACGG CTATTCTGGG TGCTGGAGAA GTGGGCCCCA CCAGGACAGC GCCTGTTTCT GGTCACCAGC GAAGGACGGA TCTTTGGCGC AGAGAAACAT GAAACGCCAA TCGTGCGTAA TTTTATTGGA TTGTCGGATA ACGCCGATCA CCCGCAAAAG AAAAATTACG GCCGCATTGA GCTTCTCGGT CCCTTTGCCG TCCGGGATGG TGATGACAAC TATCAACTTT ACCTGATTCG TCCTGCCAAT AGCCCGCAGT CAGATTTCAT TAGCCTGCTG TTTGACCGCC CTTTGCTGCT GCTGATTTTC ACTATGTTGA TCAGTTCACC GCTATTGCTC TGGCTCGCCT GGAGCCTGGC GAAACCCGCG CGTAAACTCA AGCACGCCGC CGATGAAGTC GCCAAAGGTA ATTTACGCCA GCATCCTGAA TTGGAATCTG GCCCGCAGGA ATTTCAGGCG ACGGGCGTCA GCTTTAACCA GATGGTCAGT GCGCTGGAAC GGATGGTGAC CGCACAGCAA CGTCTGCTGT CAGATATCTC TCACGAGCTG CGCACACCGC TGACGCGCTT GCAACTGGCA ACGGCGCTGC TGCGTCGGCG TCAGGGAGAA GGCAATGAGC TAAATCGTAT CGAGACGGAA ACCCAGCGGC TCGACAGCAT GATTAACGAC CTACTGGTGC TGTCGCGCAA TCAGCACAAG AACGAACTGA CCCGCGAGTT CTTGCATGCC GATGAACTAT GGGGCAATGT GCTGGACGAT GCCGCCTTTG AAGCCGAGCA GGTGGGTAAA ACGCTGGAAG TCCCTTACCC TCCAGGGCCG TGGATGCTCT TCGGCAACCC CGCCTCACTC GACAGCGCAC TGGAGAATAT CGTGCGCAAC GCGCTGCGTT ATTCTCACAG CCACATTGAA GTCGCCTTCT CGGTGGATAA TCAGGGCATC ACCATTAAAG TGGATGACGA TGGCCCCGGC GTTAGCCCGG AAGATCGTGA ACAGATTTTC CGTCCTTTCT ATCGAACAGA TGAAGCGCGT GACCGCGAAT CTGGCGGAAG CGGTTTGGGA CTCGCCATCG TCGAAACGGC GATTACACAA CACAAAGGGT GGGTAAAAGC GGAAGACAGC CCGCTGGGTG GATTGCGCTT AATCATCTGG CTGCCGTTGC ATCAACGGTA A
|
Protein sequence | MINSLTARIF AIFWLTLALV LMLVLMVPKL DSRQLTALLE NEQRQGIMLE QHIEADLANT PANDLRWWLR LFWVLEKWAP PGQRLFLVTS EGRIFGAEKH ETPIVRNFIG LSDNADHPQK KNYGRIELLG PFAVRDGDDN YQLYLIRPAN SPQSDFISLL FDRPLLLLIF TMLISSPLLL WLAWSLAKPA RKLKHAADEV AKGNLRQHPE LESGPQEFQA TGVSFNQMVS ALERMVTAQQ RLLSDISHEL RTPLTRLQLA TALLRRRQGE GNELNRIETE TQRLDSMIND LLVLSRNQHK NELTREFLHA DELWGNVLDD AAFEAEQVGK TLEVPYPPGP WMLFGNPASL DSALENIVRN ALRYSHSHIE VAFSVDNQGI TIKVDDDGPG VSPEDREQIF RPFYRTDEAR DRESGGSGLG LAIVETAITQ HKGWVKAEDS PLGGLRLIIW LPLHQR
|
| |