Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0121 |
Symbol | ugpQ |
ID | 8528471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 140040 |
End bp | 140789 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | cytoplasmic glycerophosphodiester phosphodiesterase |
Protein accession | YP_003257596 |
Protein GI | 261819490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAA TCTGGCCTTA CCCGACAATT GTCGCCCATC GCGGCGGCGG TTCACTGGCA CCGGAAAACA CGCTGGCGGC GATTGATGTC GGCGCTAGCC TCGGTCACAA GATGATCGAG TTTGACGCCA AGCTGTCGCA GGACGGCCAG ATTTTCCTTT TACACGATGA CACGCTTGAG CGCACCAGCA ACGGCTGGGG TATTGCTGGA GAACTGCCGT GGGACAAACT GGTCGGGCTG GATGTCGGCG GCTGGTACGG TCATAAATTT GTCGGCGAGC GTCTGCCGCT GTTATCAGAA GTGGCAAAAC GCTGCGTGCA GTACGGCATG GCGGCCAATA TCGAGATTAA ACCCACCACC GGATATGAAA CCGAAACCGG GCGGGTGATT GCGCTGGCGG CTCGTCAGCT ATGGGCCGAT CATCCCGCCG CGCCGCTGCT GTCATCATTC TCTATCGACG CCCTGGAAGC AGCACAGCAG GCTGCACCAG AATTGCCGCG TGGATTGTTG CTGGATGAGT GGGAAGAAGA GTGGTTGGCG TTAACACAGC GTCTGGGGTG TGTGTCCATC CACCTGAATC ACACACTGCT GACGGCGGAA CGTGTCGCGG ATCTGAAAGC GGCGGGCTTG CGCATTCTGG TTTATACCGT TAACCAAACC GATCGCGCGC AAACTTTGCT GGATTGGGGC GTTGACTGTA TCTGTACTGA CCGGATAGAT TTAATTGGGG CTAACTTCGC GACCGGCTGA
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Protein sequence | METIWPYPTI VAHRGGGSLA PENTLAAIDV GASLGHKMIE FDAKLSQDGQ IFLLHDDTLE RTSNGWGIAG ELPWDKLVGL DVGGWYGHKF VGERLPLLSE VAKRCVQYGM AANIEIKPTT GYETETGRVI ALAARQLWAD HPAAPLLSSF SIDALEAAQQ AAPELPRGLL LDEWEEEWLA LTQRLGCVSI HLNHTLLTAE RVADLKAAGL RILVYTVNQT DRAQTLLDWG VDCICTDRID LIGANFATG
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