| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0119 |
|---|
| Symbol | |
|---|
| ID | 8528469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 137923 |
|---|
| End bp | 138768 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | glycerol-3-phosphate transporter membrane protein |
|---|
| Protein accession | YP_003257594 |
|---|
| Protein GI | 261819488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGA ATCGTCGCGG GTTAGATATT TTCAGCCACG TCATGCTGAT CGTCGGCATC
CTCGCCGTAC TGTTTCCGTT GTACGTGGGG TTTGTCGCTG CCACGCTGGA TAATCAGGAA
GTCTTTCAGG CGCCGATGAC GCTCATCCCC GGTTCTCACC TGTGGGAAAA CCTGCGTTAT
ATCTGGCTGC ACGGTGCGGG CAACAACACC ACGCCGTTCG GGCTGATGCT ACTTAACAGC
TTCGTGATGG CACTGGCGAT TACGATAGGA AAAATCACCG TATCGATCCT GTCCGCTTAC
GCCATCGTCT ATTTTCGTTT TCCGCTGCGT AACTTGTTCT TCTGGATGAT TTTTCTGACG
CTGATGCTGC CGGTGGAAGT GCGTATTTTC CCGACGGTGG AAGTGATCGC GCGGCTGGAC
ATGATGGACA GCTACACCGG TTTAACGCTG CCGCTGATGG CGTCGGCGAC TGCAACGTTC
CTATTCCGTC AGTTCTTTAT GACGCTGCCG GATGAACTGA TGGAAGCCGC GCGTATCGAT
GGTGCCAGCC CGATGCGCTT CTTTTTCGAC ATGGTGCTGC CGCTGTCGAA AACCAATTTG
GCTGCGCTGT TTGTGATCAC GTTCATCTAT GGCTGGAACC AGTACCTGTG GCCGCTGCTG
ATTATCAGCG ATGCCAATTT GGGCACTGCT GTCGCTGGGA TTAAAAGCAT GATTGCCTCC
GGCGATGGCG CGACCCAGTG GAATCAGGTG ATGGCCGCAA TGCTGCTGAC CATGCTGCCA
CCGTTGCTGG TGGTGCTACT GATGCAGCGC TGGTTCGTTC GCGGTCTGGT CGACAGCGAA
AAATAA
|
|---|
| Protein sequence | MIENRRGLDI FSHVMLIVGI LAVLFPLYVG FVAATLDNQE VFQAPMTLIP GSHLWENLRY
IWLHGAGNNT TPFGLMLLNS FVMALAITIG KITVSILSAY AIVYFRFPLR NLFFWMIFLT
LMLPVEVRIF PTVEVIARLD MMDSYTGLTL PLMASATATF LFRQFFMTLP DELMEAARID
GASPMRFFFD MVLPLSKTNL AALFVITFIY GWNQYLWPLL IISDANLGTA VAGIKSMIAS
GDGATQWNQV MAAMLLTMLP PLLVVLLMQR WFVRGLVDSE K
|
|---|
| |