Gene Pecwa_0109 details

Gene Information

• Locus tag: Pecwa_0109
• ID: 8528459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 129586
• End bp: 130368
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 52%
• Product: Hydroxypyruvate isomerase
• Protein accession: YP_003257584
• Protein GI: 261819478

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAAGT TTGCTGCCAA TCTTTCTATG CTGTTTACCG ACGTGCCGTT TCTCGATCGC 
TTTAAAGCCG CTGCCGATGC GGGTTTCACT TCGGTCGAGT ACCTGTTTCC TTATGAATAT 
CCGGCATCGC TGCTGGCGGA AAAGCTGCGG GAAAATGGCT TGGTGCAAGT GTTGTTCAAT 
ACCGCGCCCG GCAATATCGC CGCAGGCGAG TGGGGCGTGT CTGCCCTACC CGACCGTGTT 
GAAGATGCGC ACCGGGATAT TGATAACGCT CTGGAATATG CACTGGCGCT GAATTGTCCT 
TCGGTGCTGG TAATGGGGGG CGTCGTTCCA CCCGGTGAAG ACCGTGCAGC CTATCAGCAA 
ACCTTTATCG ATAACCTGCG CTACGCCGCC GATAAGTTTG CGCCGCACGG TATCAATATC 
ATGATTGAGG CACTGAGCGC GAAGGTGAAA CCGAATTATC TGTTCGCCAG TCAATATCAG 
GCGCTGGAAT TAGCTAATCT GATCGACCGG CCGAACGTCT ATATCCAGTT GGATTTCTTC 
CACGCGCAGA TTGTCGATGG CAACCTGACG CAAATTATCC ACGATTTGGA TGGCCGTATC 
GGACATATTC AAATTGCCTC TGTTCCTGCA CGGCATGAAC CCGATGAGGG GGAAATTAAT 
TACCCGTTTA TCTTTGCCGA ATTGGATCGC GTGAATTATT CCGGCTGGAT TGGCTGTGAA 
TATAACCCAC GAGGCAAAAC GGAAGACGGG CTGGGATGGG TTAAACCCTG GCTGGAAAAA 
TAA 

 

Protein sequence

MPKFAANLSM LFTDVPFLDR FKAAADAGFT SVEYLFPYEY PASLLAEKLR ENGLVQVLFN 
TAPGNIAAGE WGVSALPDRV EDAHRDIDNA LEYALALNCP SVLVMGGVVP PGEDRAAYQQ 
TFIDNLRYAA DKFAPHGINI MIEALSAKVK PNYLFASQYQ ALELANLIDR PNVYIQLDFF 
HAQIVDGNLT QIIHDLDGRI GHIQIASVPA RHEPDEGEIN YPFIFAELDR VNYSGWIGCE 
YNPRGKTEDG LGWVKPWLEK