Gene Pecwa_0102 details

Gene Information

• Locus tag: Pecwa_0102
• Symbol: livF
• ID: 8528452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 117405
• End bp: 118106
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 55%
• Product: leucine/isoleucine/valine transporter ATP-binding subunit
• Protein accession: YP_003257577
• Protein GI: 261819471

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGTCAT TACATCAGGT TTCTGCCCAC TACGGAAAAA TTCAGGCGCT GCATCAGGTT 
AGCCTGCATA TTAATCAGGG CGAGATTGTC ACGTTGATCG GTGCTAACGG TGCCGGTAAA 
ACCACGTTGC TGGGCACGCT GTGCGGCGAT CCGCGCGCAA CGGAAGGCTC GATTACGTTT 
GACGGTAAGG ACATCACACA CTGGCAGACG GCGCAGATTA TGCGCGAAGC GATCGCGATT 
GTGCCGGAAG GTCGTCGCGT CTTTTCCCGC ATGACGGTAG AAGAAAATCT GGCGATGGGT 
GGGTTCTTTG CCGAGCGCGA TCAGTATCAG GAGCGTATTG CGCGCGTCTA CGATCTGTTC 
CCGCGCCTGT ATGAGCGACG CGCCCAGCGT TCCGGCACCA TGTCTGGCGG TGAGCAGCAG 
ATGCTGGCGA TTGGTCGTGC GCTGATGAGC CAGCCGCGTT TACTGCTGCT GGACGAGCCA 
TCGTTGGGGC TGGCACCGAT TATTATTTTG CAAATTTTTG ATACTATCCA GCAACTGCGC 
GAAGAGGGCA TGACTATCTT CCTGGTGGAG CAAAACGCCA ATCAGGCGCT GAAACTGGCT 
GACCGGGGTT ATGTACTTGA AAACGGCCAT ATCGTATTGG AAGATACCGG TGCGGCATTG 
TTAGCTAATG AAGCGGTACG TTCGGCCTAT CTAGGCGGAT AA 

 

Protein sequence

MLSLHQVSAH YGKIQALHQV SLHINQGEIV TLIGANGAGK TTLLGTLCGD PRATEGSITF 
DGKDITHWQT AQIMREAIAI VPEGRRVFSR MTVEENLAMG GFFAERDQYQ ERIARVYDLF 
PRLYERRAQR SGTMSGGEQQ MLAIGRALMS QPRLLLLDEP SLGLAPIIIL QIFDTIQQLR 
EEGMTIFLVE QNANQALKLA DRGYVLENGH IVLEDTGAAL LANEAVRSAY LGG