Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0092 |
Symbol | rsmD |
ID | 8528442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 107081 |
End bp | 107656 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | 16S rRNA m(2)G966-methyltransferase |
Protein accession | YP_003257567 |
Protein GI | 261819461 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAA AAAATGCATC GTCAGCCGCC GGACAAATCC GAATCATCGG TGGTCAATGG CGCGGCAGAA AACTCCCGGT TCCTGATAGC CCCGGTTTAC GTCCCACGAC CGATCGCGTG CGGGAAACGC TGTTTAACTG GCTAGCCCCC GTCATTCAGC AGGCGCGCTG TCTGGACTGC TTTGCCGGTA GCGGTGCGCT CGGGCTGGAA GCGCTGTCTC GTTATGCGGC TCATGCCACA TTATTGGAGA TGGAGCGTGC AGTCGCCCAG CAATTAACGC AAAATCTGGC ACTGCTTCGG GCGGAAAACG CTGAGGTGGT CAATACTGAT GCCCTGAGCT GGCTGGCGAA GCCGGGTACT CCGTTTGACG TCGTGTTTCT CGATCCGCCG TTCCGCAAAG AACTGCTGAA CAACACGCTT GCTCTGCTGG AACAACAGGG CTGGCTGGCA CCAGACGCGT GGATTTACGT GGAAACAGAG GCGGAAAATG CGCAACTGAC CATCCCGGAG AATTGGCAAC TGCACCGTGA AAAAATTGCG GGTCAGGTCG CCTACCGTTT GTATATCCGT CAGTGA
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Protein sequence | MAKKNASSAA GQIRIIGGQW RGRKLPVPDS PGLRPTTDRV RETLFNWLAP VIQQARCLDC FAGSGALGLE ALSRYAAHAT LLEMERAVAQ QLTQNLALLR AENAEVVNTD ALSWLAKPGT PFDVVFLDPP FRKELLNNTL ALLEQQGWLA PDAWIYVETE AENAQLTIPE NWQLHREKIA GQVAYRLYIR Q
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