| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0083 |
|---|
| Symbol | |
|---|
| ID | 8528433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 98777 |
|---|
| End bp | 99793 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ribonuclease |
|---|
| Protein accession | YP_003257558 |
|---|
| Protein GI | 261819452 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTAC CGGCAGACCC GGAGCGTCAG TCAACATCGT CAGCCCCAGC AGGGGATAAA
TCGCCACAGA AGCCTCTTTC GTTCCTGGGC AAAAGCAAAC GTCTGGCCGC TCGCATTCAG
GCGATTCCCA GCGTGGCACA CCTGATTCGT GCAGGCGAAC GTTTCAACGA TCGCATGGGC
AACCAGTTTG GCGCGGCGAT TACCTATTTT TCCTTTCTGT CGCTGATCCC CATTCTCATG
GTGTCTTTTG CCGCCGTGGG CTTCGTGTTG GCCTCCAACC CCGACCTGCT GACTGGACTG
ATCAATCGCA TTGTTAACAG TATCAGCGAT CCCAATCTGG CCAATACGCT GAAAAGTACC
GTCAACACCG CCGTGCAGCA GCGTACCACC GTCGGGCTTA CCGGTTTACT GATCGCACTC
TATTCCGGCA TCAGTTGGAT GGGAAACCTG CGTGAAGCGA TTCGCGCCCA GTCGCGCGAC
GTATGGGAAC GGAACCCAAA AGATGAAGAG AAGATTTACT TTCAGTACAC GCGGGATTTC
CTGTCGCTGA CAGGTTTGGT CATAGCGCTC ATCATCACGC TTTTCCTGAC CTCCGTTGCG
GGCACCGCGC AAAACATGAT TGTGACCGCG CTGGGGTTAG ATGGCATCGA GTGGTTGCGC
CCCGCATTAA CGCTGATTGC ACTATCCATC TCTATCTTCG CCAACTACCT GTTATTTCTA
TGGATATTTT TTGTTTTACC GCGTCATAAA CCCAAGCGCA AAGCGCTCTT TCGCGGCACG
TTGATTGCCG CCGTCGGTTT TGAAGCTATC AAGTTCGCAA TGACTGTCGC ACTGCCTAAA
CTCGCTAGTT CTCCTTCAGG AGCTGCGTTC GGCTCGGTCA TTGGCCTGAT GGCGTTCTTC
TATTTCTTCG CGCGCCTGAC GCTTTTCTGT GCCGCCTGGA TCGCGACGGC GAACTATAAA
GGCGATATCT CGACAGACCA GAACGAGCAA GAGAAAGAAC CGCCCTCTCC GCACTAA
|
|---|
| Protein sequence | MPVPADPERQ STSSAPAGDK SPQKPLSFLG KSKRLAARIQ AIPSVAHLIR AGERFNDRMG
NQFGAAITYF SFLSLIPILM VSFAAVGFVL ASNPDLLTGL INRIVNSISD PNLANTLKST
VNTAVQQRTT VGLTGLLIAL YSGISWMGNL REAIRAQSRD VWERNPKDEE KIYFQYTRDF
LSLTGLVIAL IITLFLTSVA GTAQNMIVTA LGLDGIEWLR PALTLIALSI SIFANYLLFL
WIFFVLPRHK PKRKALFRGT LIAAVGFEAI KFAMTVALPK LASSPSGAAF GSVIGLMAFF
YFFARLTLFC AAWIATANYK GDISTDQNEQ EKEPPSPH
|
|---|
| |