Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0049 |
Symbol | |
ID | 8528399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 55087 |
End bp | 56694 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003257524 |
Protein GI | 261819418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.46848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT CCCTGGTTAA ATCAAGGGTG CTGAAGTTCG GCCTTGGCTT ACTCGCCCTG TCCGTCGCTG CGGGCGTTCA GGCAAAAACG TTGGTTTACT GCTCAGAAGG TTCTCCGGAA GGTTTTAACC CACAGTTGTT CACCTCCGGT ACGACATTTG ATGCCAGCTC TATTCCTATT TATAACCGTC TGGTGGAATT TAAAGACGGC ACCACGGACA CTGGCCCGGG TTTGGCAGAA AAATGGGATA TTAGCGAAGA CGGCAAAACG TATACCTTCC ATTTGCGCAA AGGCGTGAAA TGGCAAGATA ACAAGGATTT CAAACCTTCC CGTGAATTCA ATGCCGATGA CGTGATTTTC TCCTTCATGC GTCAGCAGGA TGCCAACCAC CCGTACCATA AAGTTTCTGG CGGCAGCTAT GAATACTACC AAGGTATGGG TATGCCAGAG TTGGTTAGCA AAGTCGAAAA AGTAGACGAT TATACCGTCC GCTTTGTGCT GAGCCGCCCT GAAGCGCCAT TCCTGGCAAA CCTGGCGATG GACTTTGCTT CTATCATGTC TGCGGAATAC GCGGATAAGA TGCTGAAAGC CGGTACGCCA GAGAAGATTG ACCTGAACCC AATCGGTACA GGCCCGTTCC AGCTACAGCA GTACCAGAAA GATTCCCGTA TTTTGTACAA AGCCTTTGAA GGCTTCTGGG GCAGCAAGCC GGGCGTCGAT CGTCTGGTCT TCTCTATCAC GCCAGATGCT TCCGTGCGTT ACGCCAAGCT GCAAAAAGAC GAATGCCAGA TCATGCCGTA TCCAAACCCG GCCGATCTTG CTCGCATGAA GGAAGACAAA AATATCACGT TGATGGAACA GCCTGGCCTG AACGTTGGCT ATTTGTCCTA CAACGTTGAG AAAAAACCGC TGGATAACGT CAAGATTCGC CAGGCGCTGA ACTATGCGGT CAACAAATCT GCCATCATCG AGGCGGTCTA TCAGGGCGCG GGTCAAGCAG CAACCAACCT GATCCCGCCG ACCATGTGGG GCTACAACAA CGACGTTAAA GACTACAGCT ACGATCCTGA GAAAGCGAAA GCCCTGCTGA AAGAAGCGGG TATGGCTGAC GGCTTCACTA TCGACCTGTG GGCAATGCCG GTACAGCGTC CGTACAACCC GAACGCACGT CGTATGGCGG AAATGATTCA GTCCGACTGG GCGAAAGTGG GTGTGAAAGC CAAGATCGTC ACCTACGAGT GGGGCGAGTA TCTGAAGCGT GCGAAAGACG GCGAGCACCA GACCGTGCTG ATGGGCTGGA CGGGCGACAA TGGGGACCCA GATAACTTCT TCGCAACCCT GTTCAGTTGC GACGCAGCTA AAAATGGCTC CAACTACTCC AAGTGGTGTT ACAAGCCATT TGAAGACCTG ATCCAGCCGG CGCGTGCCGT TTCCGATCAC GAAAAACGTA TTGAATTGTA CAAGCAGGCG CAGGTTGTGA TGCACGATCA GGCTCCGGCG CTGATTGTCG CGCACTCCAC CGTGTATGAG CCAGTGCGTA AAAACGTGAA AGGTTATGTG GTTCAGCCGC GTGGCGTGCA TAGCTTCAAC AACGTGACGT TGGATTAA
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Protein sequence | MEKSLVKSRV LKFGLGLLAL SVAAGVQAKT LVYCSEGSPE GFNPQLFTSG TTFDASSIPI YNRLVEFKDG TTDTGPGLAE KWDISEDGKT YTFHLRKGVK WQDNKDFKPS REFNADDVIF SFMRQQDANH PYHKVSGGSY EYYQGMGMPE LVSKVEKVDD YTVRFVLSRP EAPFLANLAM DFASIMSAEY ADKMLKAGTP EKIDLNPIGT GPFQLQQYQK DSRILYKAFE GFWGSKPGVD RLVFSITPDA SVRYAKLQKD ECQIMPYPNP ADLARMKEDK NITLMEQPGL NVGYLSYNVE KKPLDNVKIR QALNYAVNKS AIIEAVYQGA GQAATNLIPP TMWGYNNDVK DYSYDPEKAK ALLKEAGMAD GFTIDLWAMP VQRPYNPNAR RMAEMIQSDW AKVGVKAKIV TYEWGEYLKR AKDGEHQTVL MGWTGDNGDP DNFFATLFSC DAAKNGSNYS KWCYKPFEDL IQPARAVSDH EKRIELYKQA QVVMHDQAPA LIVAHSTVYE PVRKNVKGYV VQPRGVHSFN NVTLD
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