Gene Pecwa_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0043 
Symbol 
ID8528393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp46783 
End bp48195 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content55% 
IMG OID 
Productanion transporter 
Protein accessionYP_003257519 
Protein GI261819413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCGA ATAACAGCAG GTTGATAAAG CTTCTAGTTA TCCTTTGTAT TGCCGGTGGC 
TTATGGCTAT TACCGGTTCC CGATGGGGTT AAACCCGATG CCTGGCATCT GATGGCGATT
TTTATTGCCA CAGTGGTCGG TCTGATTCTC TCTCCTTACC CGCTTGGCGC GATGGCGATG
TTCAGCCTGA CCACGGTCGC CATATTAGGG CTATTATCTA TTAAAGATGT GTTGGCGGGT
TTTAGCGATC CCACCATTTG GATGATCGCC TGTGCCTTCT TTATCTCTCG CGGTTTTATC
AAAACGGGCT TTGGTCGGCG TATTGGTCTG CTGTTCATCA GCAAGTTGGG GAATAGCTCT
CTCGGTCTGG CGTATGGTCT GGTGTTTACC GATCTGTTGT TCGCTCCGGC GATGCCTTCC
ACATCTGCAC GCTGCGGCGG GATCATCACT CCGCTGTTTC GCTCGATTGC CGAAGCCTAT
GATTCTACGC CGGAAAAAGG CACGCAGCGT CGCATTGGTG CGTTTCTGGT GCAGTCCATT
TTCCAGTGTA ACGCCGTGAC TTCCGCGATG TTCATGACCT CCATGGCGGG CAACCCAATG
GTGGCGAAAC TGGCTTCCCA GTTTGGTATC CACATCAGTT GGACGGATTG GGCGTTAGCG
ACACTGCTGC CGGGCTTCCT GTCTTTGGCG CTGATCCCTT ACCTGATCTA CCGCTTCTAT
CCGCCTGAAC TGAAGAAAAC CTCAGAAATG CGTGCGATCG CCGTCGAAAG ACTGCGCGAG
ATGGGCAAAA TGACCCGCGA TGAGTGGGTC GTGCTGGGCG TGTTCCTGGG TCTGGTGACG
TTCTGGGTAT TGGGCTCTAC GCTGAATATC GACGCGACTC TGACTGCGCT GGCTGGCCTG
AGTGTGCTGT TGCTCAGCCG TGCGCTGACC TGGGACGACG TGGTCAGTGA GAAAGAAGCC
TGGCACACCG TGGTATGGTT TGCCGTGCTG ATGACGCTGG CTGGCCAGCT TAACAAAATG
GGTCTGATTG CCTGGTTGGG CGGATTGGCC GGTAATGCGG TCAGCGGAAT GCACTGGCTG
CCAATGCTGG GTCTGCTGCT GCTGGTTTAC TACTACAGCC ACTACCTGAT GGCGAGTGCG
ATTGCCCACA TCAGTGCCAT GTACGCAATT TTTGTCTCTA TCGCACTGGC AGCCGGCGCA
CCGCCGATGC TGACCGTACT GGTGTTCGGT ATCTTCAGTA ACTTGTTTAT GTCTACGACC
CACTACTCCA GTGGCCCGGC ACCCATTTTG TTCGGCACAG GCTACGTACC GCTGGGAACC
TGGTGGAAGA TCGGCTTCCT GGTCAGTCTG GTTATCATCC CTATTTGGCT GGGTGTGGGT
AGTATGTGGT GGAAACTGCT CGGTTTCTGG TAA
 
Protein sequence
MSANNSRLIK LLVILCIAGG LWLLPVPDGV KPDAWHLMAI FIATVVGLIL SPYPLGAMAM 
FSLTTVAILG LLSIKDVLAG FSDPTIWMIA CAFFISRGFI KTGFGRRIGL LFISKLGNSS
LGLAYGLVFT DLLFAPAMPS TSARCGGIIT PLFRSIAEAY DSTPEKGTQR RIGAFLVQSI
FQCNAVTSAM FMTSMAGNPM VAKLASQFGI HISWTDWALA TLLPGFLSLA LIPYLIYRFY
PPELKKTSEM RAIAVERLRE MGKMTRDEWV VLGVFLGLVT FWVLGSTLNI DATLTALAGL
SVLLLSRALT WDDVVSEKEA WHTVVWFAVL MTLAGQLNKM GLIAWLGGLA GNAVSGMHWL
PMLGLLLLVY YYSHYLMASA IAHISAMYAI FVSIALAAGA PPMLTVLVFG IFSNLFMSTT
HYSSGPAPIL FGTGYVPLGT WWKIGFLVSL VIIPIWLGVG SMWWKLLGFW