Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0027 |
Symbol | |
ID | 8528377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 30654 |
End bp | 31943 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | d-galactonate transporter |
Protein accession | YP_003257503 |
Protein GI | 261819397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.104375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATGA CATTAACTAC CCGTCCTACA AAACGGCGCT ATCTCACCTT GCTGATGATT TTTATTACGG TTGTCATCTG CTATGTGGAT CGAGCCAACC TGGCTGTGGC ATCGGCACAC ATTCAGGAAG AGTTTGGTAT TACAAAAACA CAAATGGGCT ATATCTTCTC CGCATTTGCC TGGACCTATA CGTTATGTCA AATACCGGGC GGCTGGTTTC TTGATCGCGT CGGTTCAAAG GTCACCTACT TTATCGCCAT TATGGGATGG TCGATTGCCA CGTTGCTGCA AGGTTTCGCC ACGGGTCTGG CATCGTTGAT TGGCTTACGC GCCGTGACCG GACTGTTTGA AGCACCTGCG TTTCCGACGA ATAATCGCAT GGTGACCAGT TGGTTCCCTG AGCAAGAACG TGCTTCAGCC GTTGGATTTT ATACATCAGG GCAGTTTGTT GGCCTGGCGT TCCTTACGCC ATTGCTCATC TGGTTACAGG AAATTCTGAG CTGGCATTGG GTGTTCATCG TCACTGGCGG CGTCGGTATT GTTTGGGCAC TTATCTGGCA CTTTGTTTAT CAGCCACCGA AGAAAAGTAA AGGGATCAAT CAGGCTGAGC TGGATTACAT TGCCGAAGGC GGCGGTATTG TCGATGGTGA TGCGCCGAGC GACAAAAAAA CACGCACGCC ATTGACGGCG GCTGACTGGA AACTGGTGTT TAACCGCAAA CTGGTGGGTG TATATATCGG GCAGTTTGCC GTGACCTCTA CGCTGTGGTT TTTCCTGACG TGGTTCCCTA ACTACCTGAC GCAAGAAAAA CACATTAGCG CACTGACGGC TGGTTTTATG ACGACGGTAC CTTTCCTGGC GGCGTTCGTT GGCGTGCTGC TGTCTGGATT TGTAGCGGAC CGTTTGGTGC GTAGCGGAAA ATCGCTGGGC CTGGCGCGTA AAACGCCGAT TATCTGTGGC CTGCTGATTT CAACCTGCAT CATGGGAGCG AACTACACCA ACGATCCGGT ATGGATTATG ACGCTGATGG CTGTGGCGTT CTTTGGTAAT GGCTTTGCAT CCATCACTTG GTCACTGGTG TCGTCGCTGG CTCCAATTCG TCTGATTGGC CTGACGGGGG GGGTATTCAA CTTTGTCGGT GGTCTGGGCG GTATCACGGT GCCATTGATT ATTGGTTATC TGGCGCAGGA TTACGGTTTT GCTCCCGCAC TGACCTACAT TGCTGGTGTG GCGCTGGTCG GCGCACTGTC TTACATCTTA CTGGTGGGCG AAGTGAAGCG GGTAGGGTAA
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Protein sequence | MDMTLTTRPT KRRYLTLLMI FITVVICYVD RANLAVASAH IQEEFGITKT QMGYIFSAFA WTYTLCQIPG GWFLDRVGSK VTYFIAIMGW SIATLLQGFA TGLASLIGLR AVTGLFEAPA FPTNNRMVTS WFPEQERASA VGFYTSGQFV GLAFLTPLLI WLQEILSWHW VFIVTGGVGI VWALIWHFVY QPPKKSKGIN QAELDYIAEG GGIVDGDAPS DKKTRTPLTA ADWKLVFNRK LVGVYIGQFA VTSTLWFFLT WFPNYLTQEK HISALTAGFM TTVPFLAAFV GVLLSGFVAD RLVRSGKSLG LARKTPIICG LLISTCIMGA NYTNDPVWIM TLMAVAFFGN GFASITWSLV SSLAPIRLIG LTGGVFNFVG GLGGITVPLI IGYLAQDYGF APALTYIAGV ALVGALSYIL LVGEVKRVG
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