Gene Pecwa_0022 details

Gene Information

• Locus tag: Pecwa_0022
• ID: 8528372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 26772
• End bp: 27470
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 54%
• Product: GntR domain protein
• Protein accession: YP_003257498
• Protein GI: 261819392

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGC AAGAATTAAG CAAAACCGAC CGCATCATTC TGGATATTGG CCAACAGATC 
GTGGGTGGGA AGTACGCTCC GGGCACGCCG TTACCCGCAG AAGCTGAGCT GTGTGAAGAA 
TTTCAGACCT CGCGCAACAT TATTCGTGAG GTGTTCAGAG CGCTGATGGC GAAAAGGCTG 
GTGGAAGTGA AACGGTATCG CGGCGCGTTT GTGGCCGCGC GTAACCAGTG GAATTATCTG 
GATACCGACG TTCTGCAGTG GGTTCTGGCA AGCGACTACG ACCCACGGCT GATCAGCGCG 
ATGAGTGAGG TGCGTAATCT GGTGGAGCCG ACGATTGCTC GCTGGGCTGC CGAACGCGCG 
ACCTCAAGTG AGCTGGCGGT GATTGAAGCG GCGCTGAATG ACATGATTTC CAACCATCAG 
AATCGTGACG CGTTTAATGA AGCAGATATT CGCTTCCATG AGGCGGTGCT TGCTGCGGTG 
CATAACCCGG TGCTACAGCA GTTGAGTGTT GCGATTAGCT CGTTACAGCG TGCGGTATTT 
GAACGCACCT ATATGCCGGA CGAAGACAAC ATGCCACGGA CATTACGTGA GCATCAGGAT 
CTCTACGATG CCATTCGGCA TCAGGATATT GAAGCAGCGG AGCGGGCAGC GTTGACCATG 
ATTGCCAGCT CGACCAAACG GTTAAAGGAC ATTACATGA 

 

Protein sequence

MNKQELSKTD RIILDIGQQI VGGKYAPGTP LPAEAELCEE FQTSRNIIRE VFRALMAKRL 
VEVKRYRGAF VAARNQWNYL DTDVLQWVLA SDYDPRLISA MSEVRNLVEP TIARWAAERA 
TSSELAVIEA ALNDMISNHQ NRDAFNEADI RFHEAVLAAV HNPVLQQLSV AISSLQRAVF 
ERTYMPDEDN MPRTLREHQD LYDAIRHQDI EAAERAALTM IASSTKRLKD IT