| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0017 |
|---|
| Symbol | |
|---|
| ID | 8528367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 20754 |
|---|
| End bp | 21707 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Ribosylpyrimidine nucleosidase |
|---|
| Protein accession | YP_003257493 |
|---|
| Protein GI | 261819387 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTC TCCCTATTAT TATTGATTGC GATCCAGGGA TCGATGACGC GATTGCGTTA
TTAAGTGCAT TTGTGGCTCC CGAGCTGGAT ATTCGCGGTA TTTGCGCGGT GTGTGGCAAT
CAGCCAGTGG AAAAGACGGT GCGTAATGCG CTGCAAATTG TTGAACTGGG CCAGCGAACG
GATATTCCGG TCTTCGCCGG GTGCCATCGT CCGCTGTTAC GTGAACCGAT CCACGGCCAG
TTTCACGGCG AAAGTGGATT AGGTCAGACC GTGTTGCCGG TGCCGCAAAA GCAGGCAGAG
TCGCAGCATG CAGTGAATTT TATTATCGAA CAGTGCCAGC AGGCGATTGC CGACGGCAAG
CCTATTACGC TTTGTACGCT CGGGCCATTA ACCAATGTGG CGACAGCATT GCGTATGGTG
CCTGCGATTG CCAACGGGAT TGAACGCATC GTGATGATGG GCGGCGCGTA CCGGGAAGCG
GGTAATCGCA GCCTGACGTC TGAATTCAAT ATGATCGCCG ATCCACAGGC GGCAAAAGTG
GTATTTGATT CGTCGATTGC CATTGTTGCG CTGCCGCTGG ATGTTACGCA TCAGGTGATT
TTGACGCCGG AGTTGGTGGC GCGTTTCATC GCGCTCTCTG GGCGTATTTC TGCACCGCTG
GGTGAAATGA TGGCGTTTTG GGATCGTAAT GATATTCGCC GCTATGGTTC ACGCGGTGGC
CCGCTACACG ATCCGTTGGT TATCGCCTGG GTTCTGGCGC CACACTGCTT CACGACGGAA
AAAGCCAGCG TCTACATTGA GCAGGATAGC GAGCTGTGCA TGGGACAAAC CGTGGCTGAC
TGGTACGGAA AAACCGCGCG TCAGCCGAAT GTGGATGTGG TGACCGGGGT GGATGCCAAG
CAGGTGGTTG AACTGTTTGC TGATCTACTG AGCCGCTACG GGAAGGGGGC CTGA
|
|---|
| Protein sequence | MSALPIIIDC DPGIDDAIAL LSAFVAPELD IRGICAVCGN QPVEKTVRNA LQIVELGQRT
DIPVFAGCHR PLLREPIHGQ FHGESGLGQT VLPVPQKQAE SQHAVNFIIE QCQQAIADGK
PITLCTLGPL TNVATALRMV PAIANGIERI VMMGGAYREA GNRSLTSEFN MIADPQAAKV
VFDSSIAIVA LPLDVTHQVI LTPELVARFI ALSGRISAPL GEMMAFWDRN DIRRYGSRGG
PLHDPLVIAW VLAPHCFTTE KASVYIEQDS ELCMGQTVAD WYGKTARQPN VDVVTGVDAK
QVVELFADLL SRYGKGA
|
|---|
| |