| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0011 |
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| Symbol | |
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| ID | 8528361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 13175 |
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| End bp | 14617 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | glycoside hydrolase family 1 |
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| Protein accession | YP_003257487 |
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| Protein GI | 261819381 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTG AACAATTACC GAAAGACTTT CTGTGGGGCG GCGCAGTAGC GGCGCATCAA
GTTGAAGGTG GTTGGGATCA AGGTGGCAAA GGCACCAGCA TTTGCGATGT CCTGTCCGGT
GGTGCGCACG GCGTTGACCG TGTGATTACC GATGGTGTAC AGCCTGGTGT CAGTTATCCA
AACCATCAGG CGGTGGAGTT CTATTCCCAC TATAAGCAGG ATATCGCCCT GTTCGCCGAA
ATGGGCTTCA AATGCTTCCG TACCTCGATT GCCTGGACGC GTATTTTCCC CAATGGCGAT
GAGCTAGAAC CGAATGAAGC GGGTCTGCAA TTCTATGACG ACCTGTTTGA TGAGTTGCTG
AAATACAACA TTGAGCCAGT GATTACGCTG TCTCACTTTG AGATGCCACA TCACTTGGTT
AAGCAGTACG GCGGCTGGTT GAACCGCAAG GTAGTGGATT TCTTTGTGCG CTACAGCGAA
GTGGTTATGA AGCGTTACCA GTCTAAAGTG AAATACTGGA TGACCTTCAA TGAGATCAAC
AACCAGCGCA ACTGGCAGTA TCCGCTGTTC GGCTACTGCT GTTCCGGCGT GATTTTTACC
GATCACGACA AGCCGGAGCA GGCGATGTAC CAAACGTTGC ACCACCAGTT TGTCGCCAGT
GCGAAAGTGG TGAAGCTGGG TCATGAGATT AACCCGGATT TCAAAATTGG CTGCATGCTG
GCGTTGGTGC CGCTCTATCC GTGGTCATGT CACCCGGATG ACGTGATGTT TGCACAGGAA
GGGATGCGTC AGCACCATCT GTTCGGTGAC GTACAACTGC GCGGTTATTA TCCGTCTTAC
ATCCTGAAAG AGTGGGCGAG AAAGGGCTAT CACATTGATA TGCAGCCGGA AGATGAACAG
ACATTACGTG AAGGTTGCAC GGATTATCTG GGCTTCAGCT ACTACATGAG CAATGCGGTG
CAGTACGCGG CAAAAGGCCG GAAAACCGAA GATGTCATCG TTGGGTTTGA CGGTGGCGTG
AAAAATCCGC ATGTGAAGGC GTCGGAGTGG GGCTGGCAGA TTGACCCGGT CGGCCTGCGC
TATACGCTGA ACAGCTTCTA CGAGCGTTAT CAGAAGCCGA TGTTCATCGT CGAAAATGGC
TTTGGTGCGG TGGATAAGGT GGAAGCCGAT GGCAGCATTA ATGACGACTA CCGCATCGAT
TATCTCAAAG CACACATTGA GCAAATGAAG AAAGCCGTTG TGGAAGATGG TGTGGAACTG
ATGGGCTATA CGCCGTGGGG TTGTATCGAC TGCGTGTCGT TTACCACCGG CCAGTACAGC
AAACGCTACG GTTTCATCTA CGTGGATAAG CATGATGATG GCACCGGCAC ATTCAATCGC
TCGAAGAAGA AGAGCTTTGA CTGGTATAAG AAGGTGATTT CCAGCAACGG CGCTGAGCTA
TAA
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| Protein sequence | MSIEQLPKDF LWGGAVAAHQ VEGGWDQGGK GTSICDVLSG GAHGVDRVIT DGVQPGVSYP
NHQAVEFYSH YKQDIALFAE MGFKCFRTSI AWTRIFPNGD ELEPNEAGLQ FYDDLFDELL
KYNIEPVITL SHFEMPHHLV KQYGGWLNRK VVDFFVRYSE VVMKRYQSKV KYWMTFNEIN
NQRNWQYPLF GYCCSGVIFT DHDKPEQAMY QTLHHQFVAS AKVVKLGHEI NPDFKIGCML
ALVPLYPWSC HPDDVMFAQE GMRQHHLFGD VQLRGYYPSY ILKEWARKGY HIDMQPEDEQ
TLREGCTDYL GFSYYMSNAV QYAAKGRKTE DVIVGFDGGV KNPHVKASEW GWQIDPVGLR
YTLNSFYERY QKPMFIVENG FGAVDKVEAD GSINDDYRID YLKAHIEQMK KAVVEDGVEL
MGYTPWGCID CVSFTTGQYS KRYGFIYVDK HDDGTGTFNR SKKKSFDWYK KVISSNGAEL
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