Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0009 |
Symbol | |
ID | 8528359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 11524 |
End bp | 12837 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | PTS system, lactose/cellobiose family IIC subunit |
Protein accession | YP_003257485 |
Protein GI | 261819379 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAT TAAGCGAGTC ATTATTCAGC GTTATCGAAA ATCGTATTAG CCCGATTGCA GCAAAACTCT CCAGCCAGCG TCATGTTGTG GCAATTAAGG ATGGGTTCAT TGCCTCCATG CCCTTTTTAA TTGTCGGCTC TTTTATGATG CTATTCGCCC ATCCGCCTTT TAGCCCGACG AGTGAATGGG CTTTCGCGCA GTGGTGGTTG GGAATGGTGG AACGCCACGG CGAACAGATC ATGATGCCCT ACAATATGAC GATGGGCATT ATGGCGGTGT ATATCACCAG CGCCATCGCT TATAACCTGG CGCAGAGCTA TAAAATGAAC GGTTTTATGG CTGCCAGTCT GGCGCTGATG TCGTTTATGG TGGTGGCCGC GCCGCAGGTC GATAAGAGCT TGCCGGTCGG GTCGCTGGGC GGTGAGGGGA TTTTCACCGC GATTATCGTG GCGATCTACT CGACGGAGCT GATGCACTTT TTGCAGAAGC GGAATATTGG TATTCGCCTG CCGGAGCAGG TGCCGCCGAA AATCCGCCAG TCTTTTGATT TACTGATCCC GATCCTTGCC ATCTTCCTGA CGCTTTTCCC GCTTAGCCTG TTTATGCAGA ACCAGTTCGG TATGTTGTTA CCGCAGGCGA TTATGGCGAT CTTTGCACCG ATTATCTCAG CATCCGACTC GCTTCCCGCG ATCCTGATCG CGGTACTGCT TTGTCACCTG CTGTGGTTTG CCGGGATCCA CGGCGCGGTG ATTGTGACGG GGATTTTGCA GGCATTCTGG CTGACCAACT TAGGGATCAA TCAGGAAGCG TTTAACGCAG GCGCACCGAT CACCAAAATT TTCATTGAGC CCTTCTGGCA ATTCTTCATT ACGGTGGGAG GATCGGGGGC GACCATGGGG CTGGTTTTTC TCTATCTGCG TAGCCGCTCT GCCCACCTGC GCTCCATCGG CAAGCTGGCT GTAGTGCCGA GTATGTTCAA TATCAACGAA CCGGTGATTT TTGGTTCACC CGTCGTAATG AACCCGCTGC TGTTTATCCC GTTTATTACG GCACCGTTGG TGAACGCCAC AATCGCCTAT ATCGCATTAA AAACCGATTT AGTGCACCGC GTGATTTCTC TTGCACCCTG GACCACGCCG GGCCCGATTG GCGCAGCCTG GTCTACGGGG TGGGACTGGC GCGCGGTGGT GCTGGTGGGG GTACTGATTA TCGTGTCGTC CTTAATTTAT TACCCCTTCT TCAAAATGTA TGAACGCCAA CTGATCGCAC AGGAAGTGGG TACAGCAGAG GAGGTCGTGA ATGATGCTCG ATGA
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Protein sequence | MSKLSESLFS VIENRISPIA AKLSSQRHVV AIKDGFIASM PFLIVGSFMM LFAHPPFSPT SEWAFAQWWL GMVERHGEQI MMPYNMTMGI MAVYITSAIA YNLAQSYKMN GFMAASLALM SFMVVAAPQV DKSLPVGSLG GEGIFTAIIV AIYSTELMHF LQKRNIGIRL PEQVPPKIRQ SFDLLIPILA IFLTLFPLSL FMQNQFGMLL PQAIMAIFAP IISASDSLPA ILIAVLLCHL LWFAGIHGAV IVTGILQAFW LTNLGINQEA FNAGAPITKI FIEPFWQFFI TVGGSGATMG LVFLYLRSRS AHLRSIGKLA VVPSMFNINE PVIFGSPVVM NPLLFIPFIT APLVNATIAY IALKTDLVHR VISLAPWTTP GPIGAAWSTG WDWRAVVLVG VLIIVSSLIY YPFFKMYERQ LIAQEVGTAE EVVNDAR
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