| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0007 |
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| Symbol | |
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| ID | 8528357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 9975 |
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| End bp | 10988 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003257483 |
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| Protein GI | 261819377 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACCA TGCTCGATGT CGCAAAAAAA GCCGGTGTAT CCAAAGCCAC CGTATCACGC
GTGCTGACAG GGAATAACTA TGTCAGTAAA ACCACGCGGG ATCGGGTATT CCAGGCCATT
GAAGAGATTG GTTATCGGCC CAACCTACTG GCCCGCCAGC TCGCCACGAG CAAATCGCAA
ATCATTGGTT TGGTTGTAAC CAACACGCTG TACAGCGGCC CCTACTTCAG CGAATTACTG
TTCCAAACGG CAACCATGAC GGAAAAATAC GGCCGTCAAC TCATCATGGC GGATGGCAAA
CACAGCGCTG AAGAAGAGCG GGAAGCGATC CAATTCTTGC TCGATTTACG CTGCGATGCC
GTTATTATCT ATCCGCGCTT TCTGTCTATC GATGCGCTGG AAAGCATTAT CGAACAGTAT
GAACAGCCGA TCATGGTCGT GAACCGTACA CTGCATCAGC ACAGTGATAA CGGTATCTGC
ACCAATCACC AGCAACACAG CCATGATGCC GTCAATTACC TGATTGCGCA GGGTCACCGT
GATATCGCGT TTATCTGCGG ATCATCAAAC TCCCCCACCG GTACAAGCAG GCTGGCGGGC
TATCGACAAG CGTTAGTGGA CAACGGGATT CCCTGTGATG ACAGGCTGGT GGCACCAGGC
GACTGGACCC ATGATAGCGG TTATGCGGCG GCAAAAGCGC TGCTTCAACG AACTGCCGCC
TTCAGCGCAC TGGTTGCCAG CAATGACGAC ATGGCGATTG GCGCGGCGAA AGCACTACGT
GAACATGGCC TCGCGATTCC GCAGGATGTT TCACTGCTGG GGTTCGACGA TTTACCGATG
GCATCATGGT TCTACCCGGC ACTGACTACC GTGCATGTGC CCGTCGCCGA GATGATCAAC
TACACCCTTG AGAAACTGCT GTGTCGGTTA GAGGGGGAAA CCGTCGTACC TGCACCAGCC
TTCAAAGGCA CATTAATCAT CCGCGATTCC GTTCGCAAAG GCCCAGCAGC CTAA
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| Protein sequence | MVTMLDVAKK AGVSKATVSR VLTGNNYVSK TTRDRVFQAI EEIGYRPNLL ARQLATSKSQ
IIGLVVTNTL YSGPYFSELL FQTATMTEKY GRQLIMADGK HSAEEEREAI QFLLDLRCDA
VIIYPRFLSI DALESIIEQY EQPIMVVNRT LHQHSDNGIC TNHQQHSHDA VNYLIAQGHR
DIAFICGSSN SPTGTSRLAG YRQALVDNGI PCDDRLVAPG DWTHDSGYAA AKALLQRTAA
FSALVASNDD MAIGAAKALR EHGLAIPQDV SLLGFDDLPM ASWFYPALTT VHVPVAEMIN
YTLEKLLCRL EGETVVPAPA FKGTLIIRDS VRKGPAA
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