| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0003 |
|---|
| Symbol | recF |
|---|
| ID | 8528353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2603 |
|---|
| End bp | 3688 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_003257479 |
|---|
| Protein GI | 261819373 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0110624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCA CTCGTCTTCT CATTAAAGAT TTCCGTAATA TCGAGGCGGC CGATCTGGCG
CTGGTTCCTG GCTTTAATTT TTTGGTCGGT GCCAACGGCA GCGGTAAAAC CAGCGTGCTG
GAAGCGATTT ATACGCTAGG GCACGGGCGG GCGTTTCGTA GCATCCAGGC CGGACGTGTC
ATTCGTCACG ACCAGCCGGA ATTTGTGCTG CATGGTCGGA TTGACGGCAC GGAAACGGAG
CGATCCGTCG GGTTAAGCAA AAACCGTCAG GGCGATAGTA AGGTGCGGAT TGACGGCAGC
GATGGCCATA AAGTCGCTGA GCTGGCGCAA CTGCTGCCGA TACAACTGAT CACGCCTGAA
GGGTTTACCC TGCTTAACGG CGGCCCGAAA TATCGCCGCG CCTTTCTCGA CTGGGGCTGT
TTCCATCATG AACCCGGCTT TCTTGCGGCC TGGAGCAACA TGAAACGCCT GCTGCGCCAG
CGCAATGCGG CGCTGCGTCA GGTGAGTCAT TACGGGCAGC TCAGAGCCTG GGATCAGGAA
CTGGTGCCGC TGGCGGAGCG TATCAGCGAA TGGCGCGCGC AGTATAGCGC AGGGATTGCC
AGTGACATTG CTGCGACCTG TACACAATTT TTGCCTGAGT TTTCTCTCAG TTTCTCTTTC
CAGCGTGGTT GGGATAAAGA AAGTGAGTAT GCAGAACTGC TGGAACGGCA GTTCGAACGT
GACCGTATGT TAGGTTATAC GGCGCTGGGG CCGCATAAAG CCGACTTCCG CATCCGTGCT
AGCGGCGTGG CGGTCGAGGA TATGCTGTCT CGTGGCCAAC TCAAGCTGCT GATGTGTGCC
TTGAGGCTGG TGCAGGGTGA GTTTCTCACC CGTCAGAATG GGCTGCGCTG CCTGTATCTG
ATTGATGATT TTGCTTCCGA ACTGGATAGT ACCCGCCGCC GTTTGCTGGC TGAACGGTTA
AAAGCCACCC ATGCGCAGGT GTTTGTCAGT GCGGTTAGCG CTGAGCAGAT AGAAGACATG
ATTGGTGAAA AGGGCAAGAT GTTCCGCGTG GAACAGGGTA AAATAACGGT TCAATCACAG
GACTAA
|
|---|
| Protein sequence | MALTRLLIKD FRNIEAADLA LVPGFNFLVG ANGSGKTSVL EAIYTLGHGR AFRSIQAGRV
IRHDQPEFVL HGRIDGTETE RSVGLSKNRQ GDSKVRIDGS DGHKVAELAQ LLPIQLITPE
GFTLLNGGPK YRRAFLDWGC FHHEPGFLAA WSNMKRLLRQ RNAALRQVSH YGQLRAWDQE
LVPLAERISE WRAQYSAGIA SDIAATCTQF LPEFSLSFSF QRGWDKESEY AELLERQFER
DRMLGYTALG PHKADFRIRA SGVAVEDMLS RGQLKLLMCA LRLVQGEFLT RQNGLRCLYL
IDDFASELDS TRRRLLAERL KATHAQVFVS AVSAEQIEDM IGEKGKMFRV EQGKITVQSQ
D
|
|---|
| |