Gene Pecwa_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0001 
SymboldnaA 
ID8532973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp53 
End bp1450 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content52% 
IMG OID 
Productchromosomal replication initiation protein 
Protein accessionYP_003257477 
Protein GI261819371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00429077 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGTTTGC AGGATGAGTT ACCTGCCACA 
GAATTCAGTA TGTGGATACG CCCGTTGCAG GCGGAGCTGG GTGATAACAC TCTGGCGCTC
TACGCCCCCA ACCGCTTTGT GCTGGATTGG GTTCGTGATA AATACTTAAA TAATATCAAT
ATCCTGTTGA ATGATTTTTG CGGGATGGAT GCCCCTTTAC TGCGTTTTGA AGTGGGGAGT
AAACCGCTGG TTCAGGCTGT CAGCCAGCCC GCGCAGTCGC ACCACAATCC TGTCAGCGTT
GCGCGGCAAC AGCCAGTACG CGCGGCACCG GTACGTCCAA GCTGGGATAA CTCGCCGGTA
CAGGCAGAGC ATACCTACCG CTCCAATGTG AACCCGAAAC ATACGTTTGA TAACTTCGTT
GAAGGTAAAT CGAACCAGTT AGCCCGCGCA GCAGCACGTC AGGTGGCTGA CAACCCAGGT
GGTGCGTATA ACCCGTTGTT CCTTTATGGC GGTACTGGCT TGGGTAAAAC GCACTTATTG
CACGCGGTGG GGAATGGCAT CATTGCTCGC AAACCTAACG CGAAGGTGGT CTACATGCAC
TCCGAGCGTT TCGTGCAGGA TATGGTGAAA GCATTGCAGA ACAATGCGAT TGAAGAGTTT
AAACGCTACT ACCGCTCCGT TGACGCGTTG CTGATCGATG ATATTCAATT CTTTGCTAAT
AAAGAGCGTT CGCAGGAAGA GTTCTTTCAT ACCTTTAACG CGCTACTGGA AGGCAACCAG
CAAATCATTC TGACGTCTGA CCGCTATCCG AAAGAGATCA ACGGCGTGGA AGATCGCCTG
AAATCCCGCT TCGGTTGGGG GTTAACGGTT GCGATTGAAC CGCCAGAGCT GGAAACCCGC
GTAGCGATCC TGATGAAAAA GGCAGATGAA AATGACATTC GCCTGCCTGG TGAAGTCGCA
TTCTTTATTG CCAAACGTCT GCGTTCTAAT GTGCGTGAGC TGGAAGGCGC ACTGAACCGT
GTTATCGCGA ATGCCAACTT TACCGGCCGT TCGATCACCA TTGATTTTGT GCGTGAGGCG
TTGCGCGATC TGCTGGCGTT GCAGGAAAAA CTGGTTACTA TCGACAATAT TCAAAAGACC
GTGGCGGAAT ACTATAAAAT CAAGGTAGCC GACCTGCTGT CTAAACGTCG TTCCCGCTCG
GTGGCGCGTC CGCGCCAGAT GGCGATGGCG TTGGCAAAAG AACTGACGAA TCACAGCCTG
CCGGAGATCG GCGATGCCTT TGGCGGGCGA GATCACACGA CGGTGTTGCA CGCCTGCCGC
AAGATTGAGC AGTTGCGTGA AGAAAGCCAC GACATCAAAG AAGATTTTTC CAATTTAATC
AGAACATTAT CTTCATAA
 
Protein sequence
MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELGDNTLAL YAPNRFVLDW VRDKYLNNIN 
ILLNDFCGMD APLLRFEVGS KPLVQAVSQP AQSHHNPVSV ARQQPVRAAP VRPSWDNSPV
QAEHTYRSNV NPKHTFDNFV EGKSNQLARA AARQVADNPG GAYNPLFLYG GTGLGKTHLL
HAVGNGIIAR KPNAKVVYMH SERFVQDMVK ALQNNAIEEF KRYYRSVDAL LIDDIQFFAN
KERSQEEFFH TFNALLEGNQ QIILTSDRYP KEINGVEDRL KSRFGWGLTV AIEPPELETR
VAILMKKADE NDIRLPGEVA FFIAKRLRSN VRELEGALNR VIANANFTGR SITIDFVREA
LRDLLALQEK LVTIDNIQKT VAEYYKIKVA DLLSKRRSRS VARPRQMAMA LAKELTNHSL
PEIGDAFGGR DHTTVLHACR KIEQLREESH DIKEDFSNLI RTLSS