Gene GYMC61_1516 details

Gene Information

• Locus tag: GYMC61_1516
• ID: 8525379
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. Y412MC61
• Kingdom: Bacteria
• Replicon accession: NC_013411
• Strand: +
• Start bp: 1547953
• End bp: 1549884
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 46%
• Product: GAF modulated sigma54 specific transcriptional regulator, Fis family
• Protein accession: YP_003252636
• Protein GI: 261418954

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTGA CCCGCGAACA GGTGAAATCC ATGTGGGAAA AGTTCGTATT TCATAACGAG 
CTCGATCCCG ATTTGCCGCC CATGATTCGA GACTCTTGGC TTCGGTCGAA AAAAGCGATG 
GTTGATCCGT TTCGGCCGTA CGGGTGGATT AAAGAAATCG ACAATGAAAA GTACCGCTCC 
TTGATCGATT GGTCATTGCC GTTAATGGAA GGGTTGTATT CGATTGTCAA AGGATCTGGA 
TTTTTGGTGA TCCTGTGCAA TGAAAACGGA CAGTTGCTTT TGTCGATTGG CGATCGCGAG 
CCTTTAGCGA GGGCGGAAGA AATCGGATTT ATCGCGGGGG CGGACTGGAG CGAGCAAGTG 
ATGGGGACCA ACGCCATTGG CACATCGATC GCCATTGATC GTCCGATTCA AGTGTTTGCT 
GAGGAACATT ACACGAAAAT ATGCCAGTCA TGGACGTGTT CCGCTGCCCC CATCCATGAT 
CCCGACGGCC GAATCATTGG TGTATTGAAT ATGTCAGGAC CCTATGAAAA AGTGCACTCT 
CATACGCTAG GAATGGTTGT ATCAGCCGTA AAGGCGATTG AGTACCAACT AAAATTACAT 
GAGAATGCTG AAAAAAACGT GATGATGCAA CGGTTTTTGG AAGCGACAAC GAACAATATG 
AAAGAAGGTA TTTTAATCAT CGATCGCGAT GGGAAGATCG TAAAGGCGAA CAACCAGTTA 
AAAAAGCTGT TCCGTATACC ACAACTGCAA CTGGAAGAGA AAAAGCTCGA CGATCTTTTC 
AATGATCCCT CTATCTGTTC GAACCACCCG CTTCATTTGC AAAATCAAGA GCTGCATCTA 
AGCGTCAAGC CTTCAAACGC GGTGCACCAT GTGTTAGTTG ACAAGATTCC AATTTACGAG 
AAAAAAGAAC GAATCGGATC GATGATCATT GTAAAAGAAA TTGAAAAGGT ACGCCAGTTT 
GTCAACCACC TATCGGGAAA CCAAGCGAAA ATCACGTTTG CGGATATGAT CGGGCAACAC 
CCGTGTTTCA TTGAGAAAAT GAACGAAGCG AGGCTCGCCG CAGCGACAGA TTCCAACGTG 
TTAATATTAG GGGAAAGCGG AACAGGAAAA GAGATGGTGG CTCAGGCGAT TCATAATGAG 
AGCAAGCGGA GAAACAAACC GTTTATTGCC ATTAACTGTG GAGGCATACC GCGTGATCTC 
CTTGGCAGTG AGTTGTTCGG ATATGTGGAC GGGGCATTCA CAGGAGCGAA AAAAGGGGGA 
AGCGCCGGAA AGTTTGAGCT TGCCAATGGG GGAACGCTTT TTTTGGATGA GATTGGCGAA 
ATGTCCTTGG AAATGCAAGT GTTGCTTTTG CGCGTTATTC AAGAAAAGGA AGTGATGAGA 
ATTGGCGGGC ATAAAGTGAT CCCTGTTGAT GTCAGAATCA TCGCGGCGAC CAACAAAGAC 
CTTCGCCGGG AAGTGCAAAA AGGCAGTTTT CGTGAAGACT TGTTTTTCCG GTTGAACGTC 
ATGCCGATTG TTCTTCCGCC GCTTCGAGAA AGAAAAGAAG ATATTCCGCT TCTCGTCCGT 
CATTTTATTG AAAGACTGGC TCACAAACGA GATAAACCGT TTCCTGAGAT ACGGTCCGAT 
TTCTTAGAGG CGCTTATGCA ATACGATTGG CCAGGAAATA TTCGCGAGTT GCAAAATATG 
ATCGAGCGGG TGCTGAATCA GTGCACAAAA CCGGTATTGA CAGCGGCTGA TTTGCCGGAA 
GAAATTTTTC AGCCGTCCTG CTCGTCTCAA GTCAGGGAGA ACGTAGACAT CTCCCGAAAT 
GAGATAAAAA AGCAATCCAT CATCGAGGCG TTAAAGCAGT GCAACGGCAA CATTTCCAAA 
GCTGCCCGTT ATTTAGGCAT ATCGAGGAGC ACATTTTACC GGCAAATGGA TAAATGGAAT 
ATTTGGTATT GA 

 

Protein sequence

MIVTREQVKS MWEKFVFHNE LDPDLPPMIR DSWLRSKKAM VDPFRPYGWI KEIDNEKYRS 
LIDWSLPLME GLYSIVKGSG FLVILCNENG QLLLSIGDRE PLARAEEIGF IAGADWSEQV 
MGTNAIGTSI AIDRPIQVFA EEHYTKICQS WTCSAAPIHD PDGRIIGVLN MSGPYEKVHS 
HTLGMVVSAV KAIEYQLKLH ENAEKNVMMQ RFLEATTNNM KEGILIIDRD GKIVKANNQL 
KKLFRIPQLQ LEEKKLDDLF NDPSICSNHP LHLQNQELHL SVKPSNAVHH VLVDKIPIYE 
KKERIGSMII VKEIEKVRQF VNHLSGNQAK ITFADMIGQH PCFIEKMNEA RLAAATDSNV 
LILGESGTGK EMVAQAIHNE SKRRNKPFIA INCGGIPRDL LGSELFGYVD GAFTGAKKGG 
SAGKFELANG GTLFLDEIGE MSLEMQVLLL RVIQEKEVMR IGGHKVIPVD VRIIAATNKD 
LRREVQKGSF REDLFFRLNV MPIVLPPLRE RKEDIPLLVR HFIERLAHKR DKPFPEIRSD 
FLEALMQYDW PGNIRELQNM IERVLNQCTK PVLTAADLPE EIFQPSCSSQ VRENVDISRN 
EIKKQSIIEA LKQCNGNISK AARYLGISRS TFYRQMDKWN IWY