| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GYMC61_1180 |
|---|
| Symbol | |
|---|
| ID | 8525019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. Y412MC61 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013411 |
|---|
| Strand | + |
|---|
| Start bp | 1192777 |
|---|
| End bp | 1196838 |
|---|
| Gene Length | 4062 bp |
|---|
| Protein Length | 1353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | SMC domain protein |
|---|
| Protein accession | YP_003252315 |
|---|
| Protein GI | 261418633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATC CATGGGTGCT TCATCGCGCG GGGCTGATTA ATTTTTGGTA TTACGACGAG
CAATACTTTC ACTTCGCTGA CGGCAAGCTG CTTTTGCGGG GAAGCAACGG GGCGGGCAAG
TCGGTGACGA TGCAAAGCTT GATCCCGGTG CTTTTAGACG GCAAGAAGAC GCCCGATCGC
CTCGATCCGT TCGGTTCACG GGCGCGGCGC ATGGAAGACT ACTTGCTTGG GGAAAAAGAT
GTCGTCAATC GCGATGAGCG GACGGGGTAT TTGTTTTTGG AATATAAACG GAAAGAATCC
GACCAATACG TCACAACGGG CATCGGCCTG CGCGCAAAGC GGCAAAAAAG CCTCGACTTT
TGGGGGTTTG TCCTCTTTGA CAACCGCCGC ATCGGCTATG ACCTTCAGTT GTATAAACAA
GAAAAAACAG GTGAAAAAAT CCCGCTGACG AAACGCGAGC TCGCCGCATT GCTCGGCCCG
GGCGGGACGG TCGTCGAGAC GCAAAAAGAG TATATGGAGC TCGTGAATAA ACATGTGTTT
CGCTTTGAAT CGCTCGAGGC GTTTCAAGAA TTGATCGAAT TGCTCATTCA ACTGCGCAGC
CCGAAGCTGT CCAAAGACTT TAAGCCGACG GTGATTTATG AAATTTTGGA AAGCTCGCTG
CCTCCGTTGA CCGATGACGA GCTCCGCCAT TTATCCGAAA CGATCGAAAA CATGGACCAA
GCCAAGCAGC AGCTTGAGCA GCTCGAACGC GACGAACGGG CGTTGAAGCG TCTTTGCGAT
CAGTACCGCC TTTACAACGA ATATATGATC GCCGAAAAGG CGGCAGAATA CGTAAAAGCG
GTCAAACAAG CGGAACAGCT CGCTGCTGAA CAACACCGCC TTCACGATGA AGAAGAGCAG
GCGCGAAAGG CGCTTGATGA GCTTGATGAG TCCATCATCC GCCTCCGCCG CGAAGAAGAC
GTGCTGCGTT CACGCGAAAT CGACTTGGCT GGCCACGAAG TGTTCCAGCA AGCGGAGAAG
TATGAACAGT TGAAAGCTGA GAGGGAGCGT CTGCAGGAGC GGCGGGAGCG GCACGAGCAG
ACGATCGCGG AAAAAGAACG GCTTGAGCGG CAGCATCGCC GCCGCCTCGA TGAATCGGAA
GCGCGGTTGG ATGACCTTGA ACGGAAGCTT GAAGACGAGT TGGCGCAGCT GCGAGCGGAT
GCGGAAGAAG GAGCCTTTTC TTTACATGAA ACGAACGAAG ACGATTTTCA CCGCCATCGC
CAAAAGCAAC AAGAGTTTTC GTTTGCCGCT TGGAAACAGG AAGCTGACCG CCATATCGAG
CGGCTCGAGG AGTTGGCGCG CCTTTGGCGC AGGCATGACG ATGTGAAACG ACGCTATGAA
GAAGCGAGCA ACGAAGCGGG CGAGCGGCGG CGGGAAATGG ACGAATGGCG TCATCAGCAG
CGGAAATGGG AAGAGCTGTT CGAGCAGGAG AAAGAGCGGT TTGAACAAGC CGTGCTTGCC
TGGGTCGAGC AGGGAGGAAT CGACGTTTCC GAAACGGACA TTCAGGCGTT TTTGCAACAA
ATGGGCTCCC TCTATGAGCA GTATTCGCTC GATGATCTGA AGCGCCCGTT CGTTCAAGCG
TATTACGATG CCGTCGGTAA GAAAAAGGAT GAGAAATGGC GGCTCGAACA TGACATCCGT
CTGTTGGAAG AGAAACGGGC AGAACGTGAG GCCGAACTGC GTCAATGGCG GGAACAACGC
GACCCTGAAC CCGAACGGGA TGAACAAACG ACAGCCGCCC GCTTGGCATT GGAACAGGAA
GGGATTCCGT TTGTCCCGTT TTATGCCGCG GTCGAATTTG TCGACGATGT GCCTGAAGAT
GTGCGAGAGC GAATCGAATC GGCGCTTTCG CACGCTGGGC TGCTTGACGC CCTCATTGCG
GCTCGCGATG TCGACGTCGA CTGCGACCGT GTGCTCATCC CGAAACCGGT TCATATGGCG
CATACGTTGG CCGATTATTT GCGACCAGAT GCGGATGCCC CTGTGTCGGC GGAGCGGATT
GACGAAGTGC TCCGAAGCAT CGTGATCACC GATGCGGAAC AAGAAGGCGG CATGACGATC
GACGAAACAG GACGCTATTC GCTCGGCCTT GTCCGCGGCC ATGCGCCGCG GAGAGCGCGG
GCGATGTTCA TCGGCCGTGC GGCGCGGGAA CGGTGGCGGC TTGAGAACAT CGCGGCGCTG
GAAGCCGAGA TCGCCGCTTT GGGACAAGAG ATCGACCGTC TACGTCGTGA GCATCAGGCG
GTGGAAGCAG CCATCCGAGC GCTCGCCGAC TGGTTTGTGT CCTTCCCATC GGACCGCGAT
GTGCGCACCG CGTTTGAGGA AGGGCAAGAA GCCCGCCGTC AAGCCGAAAG CAAAGAACGG
GAATGGAAGC GGCAAGAAGA AAAAGCCGCC CTCTTGGCGC GTGAATGGAA ACAAATCAAA
CAACAGCTCC ATGACGAGTC GGCCGAGCTT GATTTGGCCT TTACCTTGGA CGGCTGCGAA
CAAGCCCAGC TCGCCATGAA ATCGTACGTC CGCCATTTGC ACGAACTCGA AGTGCTTTAC
CGCGAAACGC GCCATACCGA GGCCATGATC GCCCAACAGC GCGAGCGGCT CGCGGCGCTG
GAAACGGAGA TCGACGAAGC GAAAGGCGAA CGAAATCGGC TTCGTGATGA CGAAGAGCGG
ATCTCCTTGG AGATCGCTGA GATGGAACGG ACGCTCGCCC AAATGGGAGC GGATGACATT
CGCGCGGAAA TCGCCCGCAT CCAAGAACGA TTGGCGTTTT TGCGCCAAGA AATTCCGCGC
CTTGTCAACG AACGGGCGCG GACGGAACAG CGCCTCATGC GCTTAGTCGA AGAGCGGGAA
AAAGGAGCGC AGCGGGAAGC GTTCGCCTGC CAGCTGGCCG CCATGTGGGG GCGGTCGTTT
GCCGATGAAG CGGCGCTTGG GCTCGTGGAT CTTGATCGTT CACGTTCCCT TTTGGAGCAG
GCCAAAGAAG CGAAACAACG GTATGAAGCA GTGTTAAAAG AGACGCGTTC CTCGCTTTTG
GCGCGGCTGA ACACCGTCTT CTTCCAAGAG TCGTCCAACT TGACCGAATA CCGGGCGACG
TTCGAGCGGC TGGCGGAACA AAAGGAGCCC GAATGGATCG CCGCCGCCCC AGACGACGAG
ATGGCGATGA AAGCGGCCGA TTGGCGGGAG AAACAAGAAC GGCACGTCAT TTATCTCGAC
TACAAAGGCC AGCGCGCCAC GCCGTTTGCC GTGCTCGCCG AGGTGGAGCG CGACATCGCC
TTGCAGCACG AGTATATGAA GGAGCAAGAC CGCGAGCTGT ATGAGGACGT CATTTTAAAA
TCAGTCGGCC GCATTTTGCG CAGCCGCATC CAGCGCGCCG AGCGGTGGGT GAGCGATATG
AACAAACTGA TGGGCGGCCT CGACACGTCA TCAGGGCTCG TGCTGTCCAT TCAATGGAAG
CCGAAAACGG CGGAGACGGA AGCGGAGCTG GATACGAAAG AGTTGGTCCG TCTGTTGCGG
ATCGATTCGC GGCTGCTTAG AGAGGAAGAT TTGCAACGGG TGACGAACCA TTTCCGCTCG
AAAATCGCCC GCGCCCGCGA ATTGCTTGAG GAGCGCGGCC AAGGCAACAC ACTCCATCAA
ATTATTAAAG AAGTGCTCGA CTACCGGAAA TGGTTTGCCT TCACCTTGTA CTATGAAAAA
ACAAATGAGC CGAAACGCGA GCTGACGAAC CACCGTTTTT ACCAATTCAG CGGCGGGGAA
AAGGCGATGG CGATGTACAT TCCACTTTTC GCCGCGGCGT ATTCGCGCTA CCAAGAAGCG
GGTGATGACG CCCCGTACAT CATCTCGCTC GACGAGGCGT TCGCCGGCGT TGACGAAAAC
AACATCCGCA ATCTGTTCGG CCTTGTCGAA CAGCTCGGCT TTAACTATAT CATGAACTCG
CAGGCGCTTT GGGGCGACTA CGACACCGTG CCCGCTTTGT CCATTTGCGA ACTCGTCCGC
CCGCGCAATG CGTCGTTTGT CACCGTCATT CATTACCGTT AG
|
|---|
| Protein sequence | MANPWVLHRA GLINFWYYDE QYFHFADGKL LLRGSNGAGK SVTMQSLIPV LLDGKKTPDR
LDPFGSRARR MEDYLLGEKD VVNRDERTGY LFLEYKRKES DQYVTTGIGL RAKRQKSLDF
WGFVLFDNRR IGYDLQLYKQ EKTGEKIPLT KRELAALLGP GGTVVETQKE YMELVNKHVF
RFESLEAFQE LIELLIQLRS PKLSKDFKPT VIYEILESSL PPLTDDELRH LSETIENMDQ
AKQQLEQLER DERALKRLCD QYRLYNEYMI AEKAAEYVKA VKQAEQLAAE QHRLHDEEEQ
ARKALDELDE SIIRLRREED VLRSREIDLA GHEVFQQAEK YEQLKAERER LQERRERHEQ
TIAEKERLER QHRRRLDESE ARLDDLERKL EDELAQLRAD AEEGAFSLHE TNEDDFHRHR
QKQQEFSFAA WKQEADRHIE RLEELARLWR RHDDVKRRYE EASNEAGERR REMDEWRHQQ
RKWEELFEQE KERFEQAVLA WVEQGGIDVS ETDIQAFLQQ MGSLYEQYSL DDLKRPFVQA
YYDAVGKKKD EKWRLEHDIR LLEEKRAERE AELRQWREQR DPEPERDEQT TAARLALEQE
GIPFVPFYAA VEFVDDVPED VRERIESALS HAGLLDALIA ARDVDVDCDR VLIPKPVHMA
HTLADYLRPD ADAPVSAERI DEVLRSIVIT DAEQEGGMTI DETGRYSLGL VRGHAPRRAR
AMFIGRAARE RWRLENIAAL EAEIAALGQE IDRLRREHQA VEAAIRALAD WFVSFPSDRD
VRTAFEEGQE ARRQAESKER EWKRQEEKAA LLAREWKQIK QQLHDESAEL DLAFTLDGCE
QAQLAMKSYV RHLHELEVLY RETRHTEAMI AQQRERLAAL ETEIDEAKGE RNRLRDDEER
ISLEIAEMER TLAQMGADDI RAEIARIQER LAFLRQEIPR LVNERARTEQ RLMRLVEERE
KGAQREAFAC QLAAMWGRSF ADEAALGLVD LDRSRSLLEQ AKEAKQRYEA VLKETRSSLL
ARLNTVFFQE SSNLTEYRAT FERLAEQKEP EWIAAAPDDE MAMKAADWRE KQERHVIYLD
YKGQRATPFA VLAEVERDIA LQHEYMKEQD RELYEDVILK SVGRILRSRI QRAERWVSDM
NKLMGGLDTS SGLVLSIQWK PKTAETEAEL DTKELVRLLR IDSRLLREED LQRVTNHFRS
KIARARELLE ERGQGNTLHQ IIKEVLDYRK WFAFTLYYEK TNEPKRELTN HRFYQFSGGE
KAMAMYIPLF AAAYSRYQEA GDDAPYIISL DEAFAGVDEN NIRNLFGLVE QLGFNYIMNS
QALWGDYDTV PALSICELVR PRNASFVTVI HYR
|
|---|
| |