Gene GYMC61_1147 details

Gene Information

• Locus tag: GYMC61_1147
• Symbol: ligA
• ID: 8524986
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. Y412MC61
• Kingdom: Bacteria
• Replicon accession: NC_013411
• Strand: +
• Start bp: 1160375
• End bp: 1162387
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 59%
• Product: NAD-dependent DNA ligase LigA
• Protein accession: YP_003252285
• Protein GI: 261418603

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCGCC AACAAGCCGA ACGGCGCGCG GCCGAGCTGC GCGAACTGCT GCACCGCTAT 
GGCTACGAAT ATTATGTGCT CGACCGGCCG TCCGTCCCGG ACGCCGAGTA TGACCGGCTC 
ATGCAAGAGT TGATGGCCAT CGAGGAACAG TATCCGGAAT TGAAAACGAG CGACTCGCCG 
ACCCAGCGCA TCGGCGGCCC TCCGCTTGAG GCGTTTCGCA AAGTGACGCA TGTTGTTCCC 
ATGATGAGTC TCGCGAACGC GTTTGACGAA GGGGATTTGC GTGATTTTGA CCGCCGCGTC 
CGCCAAGAGG TCGGCGAAGC AGCGTACGTA TGCGAGTTGA AAATCGATGG CCTCGCCGTC 
TCCGTCCGCT ATGAAGACGG TTATTTCGTC CAAGGGGCGA CGCGCGGCGA CGGAACGACC 
GGCGAGGACA TTACGGAAAA TTTGAGAACG ATCCGTTCAC TGCCGCTTCG GCTGAAGGAG 
CCGGTGTCGC TGGAGGCGCG CGGCGAGGCG TTCATGCCGA AAGCGTCGTT TTTGCGCTTG 
AATGAGGAGC GAAAAGCCCG AGGCGAGGAG CTGTTTGCCA ACCCGCGCAA CGCTGCGGCT 
GGCTCGCTCC GCCAGCTCGA CCCGAAAGTG GCGGCGTCGC GCCAGCTCGA TTTGTACGTT 
TATGGTTTGG CCAATGCCGA AGAGCTTGGC ATTGAGTCGC ACAGCGAGGC GCTCCACTAC 
TTACAGGCGC TTGGGTTTAA AGTGAATCCC GAGCGGCGGC GCTGCGCCAA CATCGATGAG 
GTGATCGCCT TCGTCAACGA GTGGCACGAA AAACGGCCGC AGCTGCCGTA CGAGATCGAC 
GGCATCGTCA TTAAAGTCGA CTCGTTCGCC CAACAGCGGG AGCTTGGTGC GACGGCAAAA 
AGCCCGCGCT GGGCGATCGC CTACAAATTC CCAGCCGAGG AAGTGGTGAC GACGCTCATC 
GGCATTGAGG TGAACGTCGG CCGCACGGGC GTCGTCACTC CGACAGCGAT TCTTGAGCCG 
GTCCGCGTCG CCGGCACGAC CGTGCAGCGC GCCACTCTTC ATAATGAAGA TTTTATACGG 
GAAAAAGACA TTCGCATCGG AGATGCGGTC ATCATTAAAA AAGCGGGCGA CATCATCCCG 
GAAGTGGTCG GCGTCGTCGT CGACCGGCGC GACGGGGATG AAACGCCGTT TGTGATGCCG 
ACGCATTGTC CGGAATGCGA AAGCGAGCTC GTCCGCCTAG ATGGAGAAGT GGCGCTCCGT 
TGCTTAAACC CGAAATGCCC GGCCCAGTTG CGCGAACGGC TCATCCATTT TGCCTCAAGA 
GCAGCGATGA ACATTGAAGG GTTGGGCGAA AAAGTCGTCA CCCAACTGTT TAACGCTGGC 
CTCGTCCACG ATGTCGCCGA TTTGTACCGG CTGACGAAAG AACAGCTCAT CGGTTTGGAA 
CGGATGGGCG AAAAGTCAGC AACCAACTTG CTTGCAGCGA TTGAGGCATC GAAGCAAAAC 
TCGCTCGAGC GGTTGCTGTT CGGCCTTGGC ATCCGCTACG TCGGAGCGAA AGCCGCCCAA 
CTTTTGGCTG AGCATTTTGA AACGATGGAG CGGCTGGAAA AAGCGACGAA AGAGGAATTG 
ATGGCCGTGC CGGAAATTGG CGAGAAAATG GCGGACTCGA TCATCGCCTT CTTTTCCCAG 
CCAGAAGCGG CCGAGCTGCT CCATGAGCTG CGGCTTTACG GCGTCAACAT GGCATACAAA 
GGGCCGAAGC GGGCGGCTGA AGCGCCTGCT GACTCCGCCT TCGCCGGCAA AACGGTCGTC 
TTGACCGGCA AACTCGCGTC GATGTCGCGC AATGAGGCAA AAGAAGAGAT TGAACGGCTC 
GGCGGGCGCG TCACCGGCAG CGTCAGCCGC AGCACCGACA TCGTCATCGC CGGTGAGGAC 
GCCGGATCGA AGCTGGAGAA AGCCCAGCAG CTTGGCATTG AGATTTGGGA CGAATCACGA 
TTTTTGCAAG AGATCAGCAG GGGGAAACGA TGA 

 

Protein sequence

MDRQQAERRA AELRELLHRY GYEYYVLDRP SVPDAEYDRL MQELMAIEEQ YPELKTSDSP 
TQRIGGPPLE AFRKVTHVVP MMSLANAFDE GDLRDFDRRV RQEVGEAAYV CELKIDGLAV 
SVRYEDGYFV QGATRGDGTT GEDITENLRT IRSLPLRLKE PVSLEARGEA FMPKASFLRL 
NEERKARGEE LFANPRNAAA GSLRQLDPKV AASRQLDLYV YGLANAEELG IESHSEALHY 
LQALGFKVNP ERRRCANIDE VIAFVNEWHE KRPQLPYEID GIVIKVDSFA QQRELGATAK 
SPRWAIAYKF PAEEVVTTLI GIEVNVGRTG VVTPTAILEP VRVAGTTVQR ATLHNEDFIR 
EKDIRIGDAV IIKKAGDIIP EVVGVVVDRR DGDETPFVMP THCPECESEL VRLDGEVALR 
CLNPKCPAQL RERLIHFASR AAMNIEGLGE KVVTQLFNAG LVHDVADLYR LTKEQLIGLE 
RMGEKSATNL LAAIEASKQN SLERLLFGLG IRYVGAKAAQ LLAEHFETME RLEKATKEEL 
MAVPEIGEKM ADSIIAFFSQ PEAAELLHEL RLYGVNMAYK GPKRAAEAPA DSAFAGKTVV 
LTGKLASMSR NEAKEEIERL GGRVTGSVSR STDIVIAGED AGSKLEKAQQ LGIEIWDESR 
FLQEISRGKR