Gene GYMC61_0100 details

Gene Information

• Locus tag: GYMC61_0100
• ID: 8523896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. Y412MC61
• Kingdom: Bacteria
• Replicon accession: NC_013411
• Strand: +
• Start bp: 119776
• End bp: 123375
• Gene Length: 3600 bp
• Protein Length: 1199 aa
• Translation table: 11
• GC content: 55%
• Product: DNA-directed RNA polymerase subunit beta'
• Protein accession: YP_003251282
• Protein GI: 261417600

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTAGATG TCAATAAGTT TGAGTACATG AAAATTGGGC TCGCTTCCCC GGAGAAAATT 
CGTTCTTGGT CGTATGGCGA AGTCAAAAAG CCGGAGACAA TCAACTATCG GACGTTAAAG 
CCGGAAAAAG ACGGCTTGTT TTGCGAGCGC ATTTTCGGTC CGACGAAAGA CTGGGAATGC 
CATTGCGGCA AATATAAACG CGTTCGCTAC AAAGGCGTCG TCTGCGACCG CTGCGGCGTC 
GAAGTGACGC GCTCGAAAGT CCGCCGCGAA CGGATGGGCC ATATCGAGCT GGCTGCCCCG 
GTTTCGCACA TCTGGTATTT CAAAGGCATC CCGAGCCGGA TGGGGTTGGT TCTTGACATG 
TCGCCGCGGG CGCTCGAAGA GGTCATTTAT TTTGCATCCT ATGTCGTCAC CGACCCGGGT 
GATACGCCGC TTGAGAAAAA GCAGCTGTTG TCGGAAAAGG AATACCGCGC CTATCGCGAG 
AAGTACGGTC AATCGTTCCA AGCGTCGATG GGGGCGGAGG CGATCAAAAA GCTGCTCCAA 
GACATTGATT TGGATAAAGA GGTGGCCGCG CTGAAAGAAG AGCTGAAAAC GGCGCAAGGG 
CAACGGCGCG CCCGCATCAT TAAGCGGCTT GAAGTGCTTG AAGCGTTCCG CAGTTCAGGG 
AACGACCCGG CATGGATGGT GCTTGATGTA CTGCCGGTCA TTCCGCCGGA GTTGCGCCCG 
ATGGTTCAGC TTGACGGCGG GCGGTTTGCA ACATCGGATT TGAACGATTT GTACCGCCGC 
GTCATCAACC GTAACAACCG GCTGAAACGG CTGCTTGATC TCGGTGCGCC GAACATTATC 
GTCCAAAATG AGAAGCGGAT GCTGCAAGAG GCGGTTGATG CTTTGATCGA TAACGGCCGC 
CGCGGCCGTC CGGTGACCGG TCCGGGGAAC CGTCCGTTAA AATCGCTTTC TCATATGCTG 
AAAGGGAAGC AAGGGCGCTT CCGGCAAAAC TTGCTCGGCA AACGCGTTGA TTATTCCGGC 
CGCTCCGTCA TCGTCGTCGG CCCAAACTTA AAAATGTATC AATGCGGGCT GCCGAAAGAA 
ATGGCGCTAG AGTTGTTCAA GCCGTTCGTC ATGAAGGAGC TTGTGGAGCG GGGGTTGGCG 
CATAACATTA AAAGCGCGAA ACGGAAAATC GAGCGCGTCC ATCCGGAAGT GTGGGATGTG 
CTTGAAGATG TCATCAAAGA ACATCCGGTG CTGTTAAACC GCGCTCCGAC GCTGCACCGT 
CTCGGCATTC AGGCGTTTGA ACCAACGCTT GTGGAAGGGC GGGCGATCCG TCTTCATCCG 
CTTGTTTGCA CGGCGTACAA CGCTGACTTT GACGGCGACC AAATGGCGGT GCACGTGCCG 
CTGTCGGCTG AGGCGCAAGC CGAAGCGCGC TTGTTGATGT TGGCGGCGCA AAACATTTTG 
AACCCGAAAG ACGGGAAGCC GGTCGTGACA CCATCACAAG ACATGGTGTT GGGCAACTAC 
TACTTGACGA TGGAGCGCGA GGGAGCCATC GGCGAAGGCA TGGTGTTCAA AGACACGGAC 
GAGGCGCTGC TTGCTTACCA TAACGGCTAC GTCCATCTCC ATTCGCGCAT CGCCATTCAT 
GCCGGTTCGC TGAAAAACGA AACGTTTACC GAAGAGCAAA ACAACAAGCT GCTCTTAACG 
ACCGTCGGAA AGCTCATTTT CAACGAAATT TTGCCGAATT CGTTCCCGTA CATCAACGAG 
CCGACGACGG AAAACATTGA AGGGCGGACG CCGGACAAGT ACTTCCTTGA CAAAGGGGTC 
AACGTGCGCG AAGAAATTCG CAAGCGCGAA CTCGTGCCGC CGTTTAAGAA AAAAGTGCTC 
GGGCAAATTA TCGCTGAAGT GTTCAAACGG TTCAAAATCA CCGAAACATC GAAGATGCTC 
GACCGCATGA AAGACCTTGG CTTCCAATAT TCGACGAAGG CCGGCATCAC GATCGGCGTG 
GCCGATATCG TCGTCCTGCC GGAAAAACAA GAAATTTTGG ATGAAGCGCA AGCGAAAGTC 
GATACGGTTT TGAAGCAGTT CCGCCGCGGC TTAATTACGG ACGAAGAGCG GTACGAGCGC 
GTCATCTCCA TCTGGAGCGC GGCGAAAGAC AAAATTCAAG ACCGGTTGAT GAAGTCGCTT 
GATAAACGCA ACCCGATCTT TATGATGAGC GATTCCGGAG CGCGCGGGAA CGCGTCGAAC 
TTTACGCAGC TTGCGGGGAT GCGTGGTTTG ATGGCCAACC CGGCCGGCCG GATCATTGAG 
CTGCCGATCA AGTCGTCGTT CCGCGAAGGC TTGACGGTAT TGGAATACTT TATCTCGACG 
CACGGCGCGC GAAAAGGATT GGCGGATACG GCGCTCAAAA CGGCCGACTC AGGCTATCTC 
ACGCGCCGCC TTGTCGACGT GGCCCAAGAC GTCATCGTCC GCGAAGAAGA TTGCGGCACC 
GACCGCGGCA TTTTGGCGCG GGCGCTGACG GATGGCACGG AAGTTGTCGT CAAGCTTGAA 
GAGCGGCTTG TCGGCCGCTA TGCGCACAAA ACGGTGCGCC ATCCGGAAAC GGGCGAAGTG 
ATCGTCCGCA AAGACGAGAT GATCACCGAA GATATCGCCA ATGAGATCAT TAAAGCCGGC 
ATTACGGAAG TATGGATTCG CTCCGTATTC GCCTGCAACA CGCGCCATGG CGTCTGCAAA 
AAATGTTACG GCCGCAACAT GGCGACCGGC ATGGACGTCG AAGTTGGCGA AGCCGTCGGC 
ATTATCGCCG CTCAGTCGAT CGGCGAGCCG GGCACGCAGC TGACAATGCG GACGTTCCAT 
ACAGGCGGCG TCGCCGGCGA CGATATCACT CAAGGTTTGC CACGGGTGCA AGAGCTGTTT 
GAAGCGCGCA ACCCGAAAGG GCAAGCGGTC ATTTCTGAAA TCGACGGCAC GGTTATTTCG 
ATTAATGAAA CGCGCGACAA CCAATATGAA ATCGTCGTGC AAAGCGAGGT CGAAACGCGT 
ACGTATGTAG CGCCGTACAA CGCGCGGCTG AAAGTCGAAG AAGGTCAGCG CGTCGAACGA 
GGCCAAGAGC TGACAGAAGG CTCGGTCGAC CCGAAACAGT TGTTGCGCGT GCGCGATATT 
ACATCCGTTC AAGAGTACTT GCTTCGTGAA GTGCAAAAAG TGTACCGGAT GCAAGGGGTG 
GAGATCAGCG ACAAGCATAT CGAGGTCATG GTGCGGCAAA TGCTGCGCAA AGTGCGCGTC 
ATCGATGCCG GCGACACCGA TGTGCTGCCG GGTACGCTTT TGGATGTCCA CCAGTTTACG 
GATGTCAACG CCAAAGCTCT TCGCGAAGGG AAACGGCCGG CGACGGCCCG CCAGGTGTTG 
CTCGGCATCA CGAAAGCGTC GCTTGAGACG GATTCATTCT TGTCTGCTGC TTCGTTCCAA 
GAAACGACGC GCGTCTTGAC CGATGCAGCG ATCAAAGGAA AACGTGATGA ACTGCTTGGC 
TTAAAAGAAA ACGTCATTAT CGGCAAACTC GTCCCGGCTG GAACCGGTAT GGCCCGCTAC 
CGGAAAGTGA AGCCGGCCGT CAAAAAGGAA ACGGCTGGCG ACACGGTGTC GTCCAAATAA 

 

Protein sequence

MLDVNKFEYM KIGLASPEKI RSWSYGEVKK PETINYRTLK PEKDGLFCER IFGPTKDWEC 
HCGKYKRVRY KGVVCDRCGV EVTRSKVRRE RMGHIELAAP VSHIWYFKGI PSRMGLVLDM 
SPRALEEVIY FASYVVTDPG DTPLEKKQLL SEKEYRAYRE KYGQSFQASM GAEAIKKLLQ 
DIDLDKEVAA LKEELKTAQG QRRARIIKRL EVLEAFRSSG NDPAWMVLDV LPVIPPELRP 
MVQLDGGRFA TSDLNDLYRR VINRNNRLKR LLDLGAPNII VQNEKRMLQE AVDALIDNGR 
RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIVVGPNL KMYQCGLPKE 
MALELFKPFV MKELVERGLA HNIKSAKRKI ERVHPEVWDV LEDVIKEHPV LLNRAPTLHR 
LGIQAFEPTL VEGRAIRLHP LVCTAYNADF DGDQMAVHVP LSAEAQAEAR LLMLAAQNIL 
NPKDGKPVVT PSQDMVLGNY YLTMEREGAI GEGMVFKDTD EALLAYHNGY VHLHSRIAIH 
AGSLKNETFT EEQNNKLLLT TVGKLIFNEI LPNSFPYINE PTTENIEGRT PDKYFLDKGV 
NVREEIRKRE LVPPFKKKVL GQIIAEVFKR FKITETSKML DRMKDLGFQY STKAGITIGV 
ADIVVLPEKQ EILDEAQAKV DTVLKQFRRG LITDEERYER VISIWSAAKD KIQDRLMKSL 
DKRNPIFMMS DSGARGNASN FTQLAGMRGL MANPAGRIIE LPIKSSFREG LTVLEYFIST 
HGARKGLADT ALKTADSGYL TRRLVDVAQD VIVREEDCGT DRGILARALT DGTEVVVKLE 
ERLVGRYAHK TVRHPETGEV IVRKDEMITE DIANEIIKAG ITEVWIRSVF ACNTRHGVCK 
KCYGRNMATG MDVEVGEAVG IIAAQSIGEP GTQLTMRTFH TGGVAGDDIT QGLPRVQELF 
EARNPKGQAV ISEIDGTVIS INETRDNQYE IVVQSEVETR TYVAPYNARL KVEEGQRVER 
GQELTEGSVD PKQLLRVRDI TSVQEYLLRE VQKVYRMQGV EISDKHIEVM VRQMLRKVRV 
IDAGDTDVLP GTLLDVHQFT DVNAKALREG KRPATARQVL LGITKASLET DSFLSAASFQ 
ETTRVLTDAA IKGKRDELLG LKENVIIGKL VPAGTGMARY RKVKPAVKKE TAGDTVSSK