| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2179 |
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| Symbol | |
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| ID | 8492195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013386 |
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| Strand | - |
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| Start bp | 26066 |
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| End bp | 26932 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646360174 |
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| Product | integrase family protein |
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| Protein accession | YP_003240105 |
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| Protein GI | 260894011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.353401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACT GGCTTTCCGG CTTCGAGGTC TCTTGCCTCC GCCGCGGCCT TTCTCCCTCG
AGCGTCAGAG CCTACCTGGG AGTCGTCAGG CGCTTCGTGG CCTGGTGGGA GGGGACCAGC
GGGGAGGCCT TCGACCCCCG GGCGGTCACG CCTCTGGACG TGGCCGACTA CCGCCGGTAC
CTCCGGGGCC GTGGCCTGAA GCCCGCTACG GTCAACTTCA ACCTGGAGGC GGTGAAGAGC
TTCTTCCGGT GGCTGAAGGA AGAGCGGGCT TTGCCCGACA ACCCGGCCGA GGGGGTGAAG
AAGGTTCCCG AGGTGAAGCC CTCTCCCAGG TGGCTCACCC GGAGGGAGGT CGGGCTTCTG
GCGAGGGCCG TGCAGAGGTA CGGTACGGTT AAAGACAGGG CCCTCTTTGC CCTGCTCCTG
CACGCGGGCC TGAGGGTCTC TGAGGCGGTC TCTTTGAGGC TCGAGGACGT GGTCGTGCGG
GAGCGGTCGG GCTTCGTGCG GGTGAGATAC GGCAAGGGCG GCAAGTACCG GGAAGTGCCG
CTCAACGTCA CGGTGAGGCG CGTTCTCAAG GAGTATCTGG CGGAGCTCCC TCCTCAAGGA
GGCGGGTGGC TCTTTCCCGG TAAGAAGGGC CCCATGACTC CCAGGGCCGT GCAGAAGAGG
CTCAAGTTTT TCGGGCGCAT AGCGGGGGTG GAGGTCACCC CGCACAAGCT CCGGCACACC
TTCTGCAAGT GGCTTATCGA CGCCGGCGAG AGCCTGGATA AGGTGGCGCT TCTGGCGGGA
CACGCCAGGC TAGACACCAC TGCGGTCTAC ACCAGGCCCG GGAGGACGGA CCTGGAGAGG
GCCGTGGAAA AGCTCAGCTG GGACTGA
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| Protein sequence | MSDWLSGFEV SCLRRGLSPS SVRAYLGVVR RFVAWWEGTS GEAFDPRAVT PLDVADYRRY
LRGRGLKPAT VNFNLEAVKS FFRWLKEERA LPDNPAEGVK KVPEVKPSPR WLTRREVGLL
ARAVQRYGTV KDRALFALLL HAGLRVSEAV SLRLEDVVVR ERSGFVRVRY GKGGKYREVP
LNVTVRRVLK EYLAELPPQG GGWLFPGKKG PMTPRAVQKR LKFFGRIAGV EVTPHKLRHT
FCKWLIDAGE SLDKVALLAG HARLDTTAVY TRPGRTDLER AVEKLSWD
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