| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_R0022 |
|---|
| Symbol | |
|---|
| ID | 8490633 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 674081 |
|---|
| End bp | 675648 |
|---|
| Gene Length | 1568 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 646358683 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000353945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGGGTTTGAT CCTGGCTCAG GACGAACGCT GGCGGCGTGC CTAACACATG CAAGTCGAGC
GGGCTTGTCA GGGCCTTGTG TCCTGGCAAG TTGAGCGGCG GACGGGTGAG TAACGCGTGG
GTAACCTACC CAGGAGACTG GGATAACCCT GGGAAACTGG GGCTAATACC GGATACGCTC
CTGCTGGGGC ATCCTGGTGG GAGGAAAGGT GGCGTTGAGG CGCTGCCGCT CCTGGATGGG
CCCGCGTCCC ATCAGCTAGT TGGTGGGGTA ACGGCCTACC AAGGCGACGA CGGGTAGCCG
GCCTGAGAGG GTGGTCGGCC ACACTGGGAC TGAGACACGG CCCAGACTCC TACGGGAGGC
AGCAGTGGGG GATCTTCCGC AATGGGCGAA AGCCTGACGG AGCGACGCCG CGTGGGGGAA
GAAGGCCTTC GGGTCGTAAA CCCCTGTCGT GGGGGACGAT GCTCTAGGGG GTGAATAGCC
TCCTGGGGTG ACGGTACCTC ACAAGAAAGC CCCGGCTAAC TACGTGCCAG CAGCCGCGGT
AAGACGTAGG GGGCGAGCGT TGTCCGGAAT CACTGGGCGT AAAGGGCGCG TAGGCGGCTC
CAGAAGTCGT GGGTGAAATC CCTGGGCTCA ACCTAGGGGC TGCCCACGAA ACCATGGGGC
TTGAGGGCAG GAGAGGGGAG TGGAATTCCC GGTGTAGCGG TGAAATGCGT AGATATCGGG
AGGAACACCA GTGGCGAAGG CGGCTCCCTG GTCTGTCCCT GACGCTGAGG CGCGAAAGCT
GGGGGAGCAA ACCGGATTAG ATACCCGGGT AGTCCCAGCC GTAAACGATG GGCGCTAGGT
GTGGGGGAGT GTTAACTCCT CCGTGCCGTA GGTAACCCAT TAAGCGCCCC GCCTGGGGAG
TACGGTCGCA AGACTGAAAC TCAAAGGAAT TGACGGGGGC CCGCACAAGC GGTGGAGCGC
GTGGTTTAAT TCGATGCTAA GCGAAGAACC TTACCAGGGC TTGACATGCT GGTGGTAGCG
ACCCGAAAGG GAAGCGACCC CGGGGTTTAG CCGCCGGGGA GCCAGCACAG GTGGTGCATG
GTTGTCGTCA GCTCGTGCCG TGAGGTGTTG GGTTAAGTCC CGCAACGAGC GCAACCCCTG
CCCCTAGTTG CCAGCGGGTG AGGCCGGGCA CTCTAGGGGG ACTGCCGTCG ACAAGACGGA
GGAAGGTGGG GATGACGTCA AATCATCATG CCCCTGATGC CCTGGGCTAC ACACGCGCTA
CAATGGCCGG TACAGCGGGA AGCGAAGCCG CGAGGCGGAG CAAATCCCTG AAAGCCGGTC
TCAGTTCGGA TTGCAGGCTG CAACTCGCCT GCATGAAGCC GGAATCGCTA GTAATCGCCG
GTCAGCATAC GGCGGTGAAT ACGTTCCCGG GCCTTGTACA CACCGCCCGT CACACCACGG
AAGCCGGCAA CACCCGAAGT CGGTACTCCT AACCCTCGCA AGAGGGAGGG AGCCGCCGAA
GGTGGGGCCG GTGACTGGGG TGAAGTCGTA ACAAGGTAGC CGTACGGGAA CGTGCGGCTG
GATCACCT
|
|---|
| Protein sequence | |
|---|
| |