| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2123 |
|---|
| Symbol | |
|---|
| ID | 8492132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 2108537 |
|---|
| End bp | 2109094 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646360112 |
|---|
| Product | Pyruvate/ketoisovalerate oxidoreductase |
|---|
| Protein accession | YP_003240050 |
|---|
| Protein GI | 260893953 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.343194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAC CTCTTAAGAT CGTGGTGGCC GGTGAGGGAG GACAGGGAGT GCAGGCGGTG
GCCGAGATCT TGGCCGAGGC GGCCTACGAT GAGGGGAAAG AGGTCCTTTA TATACCGGCC
TTCGGCGTGG AGCAGCGGGG CGGAGTCTCC CTGGCCTACC TGCAGGTAGG GGACGAGCCT
GTACCTGCTC CCAAGTTCGA GAAGGCGGAC ATCGTGGTGG CCCTGAGCGG GCGGGCGGTT
CGGCGGACAC GGCAGTACGT GGGGCCGGAA ACTATCTTCA TTTACGACAC GCACGCCGAC
GTTCAGGAGG AAGAACTGCC CAAGGAGGCC AAGCGCCTGA TCCCCATACC CGGCATCGAG
GTGGCCCGCA AGGAACTCCA TCCCCGGGTT TTCAACATCC TCATTATGGG GGCGCTTATC
AAACTTACCT CCATTGTGGG GCTGGAAGAT GCCAAGAAGG CCCTGGAGAA GCGTCTGGGG
CACCGCTTCG AGAAGGATCC CAGCCTGCGG GAGCTCAACT ATCGGGCTCT GGAGAAGGGC
ATGGCGCTGG TAAGCTAG
|
|---|
| Protein sequence | MGKPLKIVVA GEGGQGVQAV AEILAEAAYD EGKEVLYIPA FGVEQRGGVS LAYLQVGDEP
VPAPKFEKAD IVVALSGRAV RRTRQYVGPE TIFIYDTHAD VQEEELPKEA KRLIPIPGIE
VARKELHPRV FNILIMGALI KLTSIVGLED AKKALEKRLG HRFEKDPSLR ELNYRALEKG
MALVS
|
|---|
| |