Gene Adeg_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_2091 
Symbol 
ID8492100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand- 
Start bp2084407 
End bp2085045 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID646360080 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_003240018 
Protein GI260893921 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGG AAAGTGGCTT CAAAAGATTT GTGGCTGAGC AACAGGCCAG GCTGAACGAG 
AATCCGGAGT GCGCCACCTC ACTTTACAAT CTGGGAGTCA TGGCTTTGCA GGAAGGGCGC 
CTGGAAGAGG CGGAGGATTA TTTCTTAGAG GCTATCCAGA ACGGGCTGAG AATGTTCGAG 
GCCTGGGTTA ACCTAGGTTA CATCTACTTC AAGCGGGGAG AGTTGGAGAA GGTCATCGAG 
GCCAATAAAG CCGCTATAGA GATCGAGCCG CGCTACTCGC GCGGTTACGC TAACCTAGGT 
TTTGCTTACT TGCAGCTTGA GCGCACGGAG GAGGCCATTT CGGCCCTGGA AAAGGCCCTA 
GAGCTGGAGC CCAGGATGGC TCAGGCCTGG TGCAACCTGG TGAGCGCCTA CCTGCAGAAG 
GGGGATATCG ATAAGGCGAT AGAAGTAGGT AAGACCGCTG TAGAGGTGGC TCCTGATTTT 
GGGCTGGCCC ACAACAACCT GGCCTGCGCT TACTATCTAA AAGGGGACTA CGAGCGGGCC 
GCCGAGCACC TGGAGTTGGC GCTCAAATAT CAGTTTCCCG TTCACCCGGA GTTTCAAGAA 
GCCATGAAGC CTTACCTTAA GCGGGGGAAG GAAGAATGA
 
Protein sequence
MEKESGFKRF VAEQQARLNE NPECATSLYN LGVMALQEGR LEEAEDYFLE AIQNGLRMFE 
AWVNLGYIYF KRGELEKVIE ANKAAIEIEP RYSRGYANLG FAYLQLERTE EAISALEKAL 
ELEPRMAQAW CNLVSAYLQK GDIDKAIEVG KTAVEVAPDF GLAHNNLACA YYLKGDYERA 
AEHLELALKY QFPVHPEFQE AMKPYLKRGK EE