| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2048 |
|---|
| Symbol | |
|---|
| ID | 8492056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 2042797 |
|---|
| End bp | 2043639 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646360037 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003239976 |
|---|
| Protein GI | 260893879 |
|---|
| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTCCAT TTAGCAAGAA AAGCGGAATT TTCGCCGAAG ATTACTTCCC TCTCCTTTGT
TCTCCGGAGG AGCTGGAAGC CTCTTACGCC CGCTGCCGCG CCTGCGGCGT GCCGCAAGAT
TTAACCCGAC CCCGAGAGAT TTTGGATCCC GCTGCCTTGA CACCCCGTCT TAAAGCCGCC
GAACTCCTTC TATCCCTGGC TGAGAAGACA GTAAAGCCGA TATGCACCAC CGACTCCCAG
CGGAACTTCA TCTGCATCCT CTGCGACCCG GAACTGGTTG CCCTCAAGCT TTACGCCTCG
CCCGAGATTC TGGAAGCCGC GGCAAAAGTG GGTGTAGTCC CAGGTACGGT CTTCACCGAG
GAAAGCTGCG GTACCAACGC CCTGGCCCTG GCACGGGAGC ATAAGCGCCT CATTGCCATT
CGCGGCGAGC AACATTTCTG CCAGTTCTTC CACAACTGGT GTTGCGTGGC AGCCCCCGTG
CAGGGCCTCG GCAACTCCAC CCTGGGGTAC CTAGACATCT CCATGCACGC CGAAAGGGAG
CTCGGCTTCG CCGTAACCTT CCTCAAAACG CTGCTTTTAC TTATGAAAAA AGAACTGGCG
CTCGCCCGCG AGATCTCCTC GCTCCCGCTA GAGATCGAGC GCCGCCTTTC TCCTCGCGAA
AGGGAAATAT TGTTCCTTCT GCTCCGCCGG CTTACCAACG AAGAAATCGC CGCTTACCTC
AACCTCAGTG TCTACACCGT AAAGACCTAC CGCAAGTTCA TCTACCGCAA GCTCGGTGTC
AGCAGCTTCA ACGAACTTCT GGCGAAATAC CGAACCGCGG CAGAAAGGCT CGATTTAAAC
TAA
|
|---|
| Protein sequence | MAPFSKKSGI FAEDYFPLLC SPEELEASYA RCRACGVPQD LTRPREILDP AALTPRLKAA
ELLLSLAEKT VKPICTTDSQ RNFICILCDP ELVALKLYAS PEILEAAAKV GVVPGTVFTE
ESCGTNALAL AREHKRLIAI RGEQHFCQFF HNWCCVAAPV QGLGNSTLGY LDISMHAERE
LGFAVTFLKT LLLLMKKELA LAREISSLPL EIERRLSPRE REILFLLLRR LTNEEIAAYL
NLSVYTVKTY RKFIYRKLGV SSFNELLAKY RTAAERLDLN
|
|---|
| |