| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2044 |
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| Symbol | fliF |
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| ID | 8492052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 2039718 |
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| End bp | 2041214 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 646360033 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_003239972 |
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| Protein GI | 260893875 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGTTGG CTACAAAGCC GGTATGGGAG CGCTGGAAGA GCCGTTGGGA GTCCTTTAGC
CCGGTCCAGC GCGTGGCCGT GGTGGTAGCC GGGGTGGCAC TCATCGCCTG CTGTGTCTTT
CTCCCCCTTT ACCTGGCACA GCTTAACTAC GCCCCTCTCT TTAAAGGGCT GCGCCCGGAA
GATGCCGGAG CAGTAGTGCA GAAGCTGGAA GAAATGAAGG TTCCCTACCG GATGACCGAC
GGTGGCACTA CCATCCTGGT GCCCAAAGAT CAGGTCTATA AAGTGCGGGC GGAGCTGGCG
GCTAAAGGAG CTTTGCCCGG GGCGGGCAAA GGTTTCGAGC TCTTTGACAA GACCAGGCTG
GGGATAACCG ACTTCGAAGA GCAGGTGAAC TACCAGCGGG CTTTGCAGGA GGAGTTACGC
CGCACCATCT TGCAGTTTGA CGGGGTGGAG GACGCGCGGG TGCACCTGGT CCTGCCGCCG
CGAAGCCCCT TCGTCACCGA GCAGCCCAAG CCCTCGGCTT CGGTGGTTCT GAAGCTTAAG
CCTCTGGAAA AGCTCAAGCC GGAGCAAGTG GAGGGAATTG TGGCCCTGGT AAGCGGGGCG
GTGCAGGGAC TCAAGCCCGA AGATGTCCGA GTGATCGACA CGCGGGGAGA AGTACTTACC
CCGCCGACCC AAGGTGGCGA AGTGGGAGCG GTCAGGAACC AGCAGGAGCT CGTGCTGGCT
TTCGAGCGGG AGCTCGAGCG GCGGGTGAAA AACTTGCTCG ACCAGATCTT AGGCCCCGGC
AAGGCGGCGG TAATGGTTAA CGCCGACTTC GACTTCAGCC GGCGGGAAGT GGTCACCGTG
CTGCCCCAGG GCCAGGTGCC GGTAAGCGAG CATACCCTTA CCGAACAGGG AGCGGCTCAG
GCGGCCGCAG GAGTGGCCCC CACTTATCCT GCCGGAGGAG CGGGAGGGCA GAACTACTCC
AAGCAGGAGA CCACGCGCAA CTACCAGGTG GGGGAGCAGC GGGAGAAGGT CATAGAGGTG
CCGGGGAGGC TCAGGCGCCT GACCGCCTCG GTGGTGGTGG ACGGCAACTT GGATCCGGTC
ACCATGCAGA AGATCCAGAA CTTGGTGGCC GGGGCTTTGG GCTACAACCC CCAACGGGGG
GACCAGATAA CGGTGGATAG CTTCACTTTC GACCGCACCT ACCAGCGCCA GATGGAGGCG
GAGATGGCCA AGGCGGAGGC CAAAGCCCGG CAGGAGGCGG CCAAGCGGCG GCTTTACACC
CTGATAGGTG CCGGAGCGGG CGGGCTTCTG GGACTGGTGC TGCTCCTTTT GCTCCGGCGG
CGCCTGCGGC GGGCGCCTGA GGCGCCAGTG GTGGAGGAGG TGGTCCCGGT GGCTGTCACG
GCCGTTCCTC CTCCATCCCC GACCGACCAG AAATTCGCTG AGGTGAAAGA ATTGGCAGAA
AAGCGGCCGG AAGAAGTGGC AGAGATCATC AAGGTCTGGC TCCGCTCGGA AGAGTAA
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| Protein sequence | MALATKPVWE RWKSRWESFS PVQRVAVVVA GVALIACCVF LPLYLAQLNY APLFKGLRPE
DAGAVVQKLE EMKVPYRMTD GGTTILVPKD QVYKVRAELA AKGALPGAGK GFELFDKTRL
GITDFEEQVN YQRALQEELR RTILQFDGVE DARVHLVLPP RSPFVTEQPK PSASVVLKLK
PLEKLKPEQV EGIVALVSGA VQGLKPEDVR VIDTRGEVLT PPTQGGEVGA VRNQQELVLA
FERELERRVK NLLDQILGPG KAAVMVNADF DFSRREVVTV LPQGQVPVSE HTLTEQGAAQ
AAAGVAPTYP AGGAGGQNYS KQETTRNYQV GEQREKVIEV PGRLRRLTAS VVVDGNLDPV
TMQKIQNLVA GALGYNPQRG DQITVDSFTF DRTYQRQMEA EMAKAEAKAR QEAAKRRLYT
LIGAGAGGLL GLVLLLLLRR RLRRAPEAPV VEEVVPVAVT AVPPPSPTDQ KFAEVKELAE
KRPEEVAEII KVWLRSEE
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