Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_2031 |
Symbol | |
ID | 8492039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 2030998 |
End bp | 2031765 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646360020 |
Product | type III secretion system inner membrane R protein |
Protein accession | YP_003239959 |
Protein GI | 260893862 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAG CCCTGGCTGA GCTTTATCTC CTTTACCTCC TGGTCTGGGC CCGCCTTCTG GGGTTCACCC TGGCCTTTCC CCCTCTGGCC CTGCCCGGTT TGCCGGTGCT CTGGCGCCTG GGGGTGGCCA TGAGCCTCTC CCTCTTCGTC ACCCCCCTTT TGCCGCCGGA CCGCCCTTTT TCGGGCGGGG CGTGGGAGTG GGCCCTGACC TGGGCGGGGG AGTTCACTTT AGGCTTAGGG ATGGGCTTCG TGGCCGGGCT TGTCTTTCAG GCCCTGCGGG TTGCTGGCCA GCTCATGGGG CTGCAGATGG GTTTCGGAAT GGCGGAGCTT TTGACCCTGG GGGGCGTACC GGAGACTATG CTGGCAGAAT TCTTCTTTCT TCTGGGGACG GTTCTCTTCT TCACCACCGA CGCCTACCAA TACCTGATCG AGGCACTGGT GCGCAGCTAC GAGGTACTGC CCCTGGGGGG TGCGGCGGTT AAGGGAGGGG CGATTTGGCT TACGGTGAAG CTCGTGGGCG GCATGCTGGC GACGGCTTTG CAGCTGGCGG CGCCCGTACT GGCGGTGACG GTGCTCATCG ACGCCTCTTT GGGGTTGCTT GTGCGCATGG TGCCTCAGAT TAACGTCTTC ATGCTCGGCT TCCCCCTCAA GATCGGTGCT TCCCTTCTGC TCCTCGGGCT GCTGGCCACC ACGCTCGGCA CGGTCATCGG GAGGCTTTTG CAGGAAGTGG CGCATAATTT GCTGTTGCTC ACCAGGGGGT TGAGCTAG
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Protein sequence | MPEALAELYL LYLLVWARLL GFTLAFPPLA LPGLPVLWRL GVAMSLSLFV TPLLPPDRPF SGGAWEWALT WAGEFTLGLG MGFVAGLVFQ ALRVAGQLMG LQMGFGMAEL LTLGGVPETM LAEFFFLLGT VLFFTTDAYQ YLIEALVRSY EVLPLGGAAV KGGAIWLTVK LVGGMLATAL QLAAPVLAVT VLIDASLGLL VRMVPQINVF MLGFPLKIGA SLLLLGLLAT TLGTVIGRLL QEVAHNLLLL TRGLS
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