Gene Adeg_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_2017 
Symbol 
ID8492025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp2019012 
End bp2020094 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID646360006 
Productflagellar motor switch protein 
Protein accessionYP_003239945 
Protein GI260893848 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM
[TIGR02480] flagellar motor switch protein FliN
[TIGR02551] type III secretion system apparatus protein YscQ/HrcQ 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATG AACATTTCTT GAGCCAGGAG GAAATCGATG CCCTCTTGAA GGGGTTCGGT 
GCTTCTCCGG ACGAGGGCTC TGGAACTGCT AAGGAGAACC CCGAGCTTAC CGAGGAAGAA
AAGGACGCTT TAGGTGAGAT AGGCAACATT GCCATGGGAG CAGCAGCCAC GGCCCTTTCG
GAGATTCTGG GCCGGCGGGT CACTATCACC AGCCCCCACG TGCAGGTGAC CACCAAGGAA
GAACTGCTCA AGAGCTTCAC CGTGCCTTAC CTAATCGTTT CGGTTCCCTA CACCGAGGGG
TTAGAAGGCC TCAGTCTTCT GGTGGTGAAG GTAGAAGACG CTTCGGTAAT AGCCGACCTC
ATGATGGGGG GCGAGGGCAA GCGCTCTCCC ACCCTGGGCG AGATAGAGAT AAGCGCGGTG
GCGGAGGCCA TGAACCAGAT GATGGGGGCG GCAGCCACCT CTCTGGCCGA TATTTATCAC
CGCACGGTGG GCATCGCCCC GCCGCAGGTG CGCATTTTTT CTAAGGAAGG AGAAGCCGCG
ACCAACGATT TGGGGGTAGA AGACCCCATC GCCGTGATCT CCTTCCGGAT GACGATAGAG
GATTTACTCG ATACCGAGAT CATGCGGGTG CTGTCGGTGA GCACTGCCAA AGAAGAGGCT
TCTCTCCTCT GGCAGGGGGT TTATGGCGAG GAAGAGAAAA GGGAGAAGCC TTATTCCGAA
AAGCCTTCTC CCGCGGAGGA AGCGGCGGCT ACTGCCGCCC CAGCCGTTAC TCCTTCTTCT
CCGGCTCCCC CTCCTCTGGA CGTGGATCGC TCCCGCCTGG AGCTTATCTT GGACATTCCT
CTCAAGGTCT CGGTGGTGCT GGGGCGCACG CGCCGTCCCA TAAAGGAGAT CCTGGGCTTG
GGGCCGGGGA GTATCCTGGA GTTGGACGCC CTGGCCGACG AGCCGGTGGA AATACTGGTA
AACGGAGTAC TGGTGGCCCG CGGCGAGGTG GTGGTAGTGG AAGAGAATTT TGGCGTGCGC
ATCACCAGCA TAGTCACCCC CCAGGAGCGC CTCCGCTACT TAGCTCGGCC CCGGAAGCGT
TGA
 
Protein sequence
MKDEHFLSQE EIDALLKGFG ASPDEGSGTA KENPELTEEE KDALGEIGNI AMGAAATALS 
EILGRRVTIT SPHVQVTTKE ELLKSFTVPY LIVSVPYTEG LEGLSLLVVK VEDASVIADL
MMGGEGKRSP TLGEIEISAV AEAMNQMMGA AATSLADIYH RTVGIAPPQV RIFSKEGEAA
TNDLGVEDPI AVISFRMTIE DLLDTEIMRV LSVSTAKEEA SLLWQGVYGE EEKREKPYSE
KPSPAEEAAA TAAPAVTPSS PAPPPLDVDR SRLELILDIP LKVSVVLGRT RRPIKEILGL
GPGSILELDA LADEPVEILV NGVLVARGEV VVVEENFGVR ITSIVTPQER LRYLARPRKR