| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2011 |
|---|
| Symbol | |
|---|
| ID | 8492019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 2012493 |
|---|
| End bp | 2012900 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646360000 |
|---|
| Product | hydrogenase nickel insertion protein HypA |
|---|
| Protein accession | YP_003239939 |
|---|
| Protein GI | 260893842 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCACGAAC TCAGCATCGT GCAATCGATG ATGGAGCTCA TACAAGAGAG TGCCGCCGCC
AACCGGGTGC GCCGGGTGAC CAAGGTCAAG CTGGTGGTGG GGCAGCTCAC CCTGGCCCAG
CCCGATCTTC TACAGTTTGC TTTTGCCACC CTGGCGCCGG AGACCATATT CGAGGGGGCG
GTGCTGGAGA TAGAAGAGCG CCCCTTGGTC ATGCGCTGCC GCCAGTGCGG GGAAACCTTT
AAGCCGGAGT ACATCCAGTA TGCCTGTCCT TCCTGCGGGG GGCGCTGTGA GGTCGTAAGC
GGGAAAGAGC TTTACGTGGA CTTCTACGAG GGGGATACGG AGGAGGAGGA GGAGGAGGAA
CATGGAGATA AAAGTGGTAA TGGGGCAACG GCTGCTCCGT GCCAATGA
|
|---|
| Protein sequence | MHELSIVQSM MELIQESAAA NRVRRVTKVK LVVGQLTLAQ PDLLQFAFAT LAPETIFEGA
VLEIEERPLV MRCRQCGETF KPEYIQYACP SCGGRCEVVS GKELYVDFYE GDTEEEEEEE
HGDKSGNGAT AAPCQ
|
|---|
| |