| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2010 |
|---|
| Symbol | |
|---|
| ID | 8492018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 2011859 |
|---|
| End bp | 2012539 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359999 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_003239938 |
|---|
| Protein GI | 260893841 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB
[TIGR00101] urease accessory protein UreG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAA AAGTGGTAAT GGGGCAACGG CTGCTCCGTG CCAATGAAGA AGTGGCGCGG
AAGGTGAGGG AGCGCCTGGC AAGGAGTACC TGCCTCATGG TAAACCTCAT CAGCTCCCCC
GGGGCGGGCA AGACCACCCT TTTGGAGGCT ACTTTGGAGC GCCTGAGGGA CCGGTGGCGC
ATAGGGGTGA TCGAGGGGGA CGTTTACACC GTCCGCGACG CGGCCCGCAT AGCGCATCTT
GAGGTCCCAG TGGTGCAGAT CAACACGGCG GGGGTGTGCC ACCTCAGCGC TTCCATGGTG
GCCAAGGCAC TGGAGGAGCT GGGGGAAGGT CCTTTCGACC TCATCTTCGT GGAAAACGTG
GGGAACCTGG TCTGCCCGGC TGAGTTTGAT CTAGGAGAAG ACGCTAAAGT GGCCCTTTTG
AGCGTCACGG AGGGGATAGA CAAGCCGGCG AAGTACCCGC TGGTTTTCGA GCAGGCCCAG
CTTGTTCTCA TAACCAAGGG GGACTTACTC CCCTACCTGG AGTTCGACCT GGAAGAGGTA
AAGAAAGACG TACACCGCTT AAACCCTGAA GCTCCGATCA TAGTCACCTC GGCTAAGACC
GGAGAGGGGC TGGAAGCATG GTGCCAGTGG CTGGAAGAGC GGCTTCGGCA GAAAAAGGAG
GCCGCGTCCG TTACCGCCTG A
|
|---|
| Protein sequence | MEIKVVMGQR LLRANEEVAR KVRERLARST CLMVNLISSP GAGKTTLLEA TLERLRDRWR
IGVIEGDVYT VRDAARIAHL EVPVVQINTA GVCHLSASMV AKALEELGEG PFDLIFVENV
GNLVCPAEFD LGEDAKVALL SVTEGIDKPA KYPLVFEQAQ LVLITKGDLL PYLEFDLEEV
KKDVHRLNPE APIIVTSAKT GEGLEAWCQW LEERLRQKKE AASVTA
|
|---|
| |