| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2009 |
|---|
| Symbol | |
|---|
| ID | 8492017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 2009601 |
|---|
| End bp | 2011922 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646359998 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_003239937 |
|---|
| Protein GI | 260893840 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCAG TGGCTGGAAG AGCGGCTTCG GCAGAAAAAG GAGGCCGCGT CCGTTACCGC
CTGACCGTCA AGGGCACGGT GCAGGGCGTA GGCTTCCGTC CCTTCGTCTA CCACCTGGCC
GTGAAGTATG GGCTTAAGGG CTTCGTGCGC AACGACGCCC AGGGGGTCTA TGTGGAAGTG
GAGGGCGGGG AGGAGGAGGT CAAGCGCTTC TGTAAGGAAC TTTGCCAGCA CCCCCCGCGC
CTGGCCCGGA TAGCTGAGCT TCTGGTGGAG GTGCTGCCGC CGGCGGGTTA CTCCGCCTTT
GAGATAGATT TGAGCCGTGC GGCTCCAGAG AAGGAGGCAC TGGTTCCTCC GGACGTGGCC
ATTTGCCCCG ATTGCGCCCG GGAGATTTTT GATCCCGAGG ACCGGCATTA CCTTTACCCC
TTTACTAACT GCACCAACTG CGGCCCCCGT TTCACCATCG TGCGGGAGCT CCCTTACGAC
CGGGCGCGCA CCTCCATGGC TTCTTTCCCC ATGTGCCCGG ACTGCTCCCG CGAGTACCAC
GACCCCTTGG ACCGGCGCTT CCATGCCCAG CCGGTGGCCT GCCCGCGCTG CGGTCCTCAG
CTCAAGCTTT TCGACGCTCA GGGGAGATCG GTGGAGGGGG ACTGGCGGGA AAATTGCTGG
GAACTTTTGC GGGCAGGGAA GATCCTGGCG ATTAAGGGCT TGGGCGGCTT TCACCTCTGC
TGCGACGCCC TTGAGCCTCG AGTGGTGGCC CTGCTGCGCC GGCGCAAGCG GCGTCCCCAC
AAGCCCTTGG CCGTCATGGC GCGGGATCTG GAGGTGGTGC GCCGCTTCTG CGAGCTTGGC
CCGGTTGAGG AAGAGCTGCT CACCTCGCCG GCGGCGCCCA TCGTGGTGCT GAAGAGGCGC
CCGGAGGCGG GCTTGCCGGA GGAGCTGGCC CCCGGCCTTA AAACCCTGGG GGTCATGCTG
CCCTACACAC CGCTGCACCT CCTGCTCCTG CAAGGCCCCC TTCCCTTGCT GGTCATGACG
AGCGGCAACC GCTCGGGCCT GCCTCTTTGT AAGGACAACG AGCGGGCCTG GGAGGAGCTG
GGAGACATTG CCGACTACTT CCTCATCCAC AACCGGGACA TCGTCAACCG CTGCGACGAC
TCGGTAGTGG CGGTAATGGG AGGTATACCC GCCTTTTACC GGCGCTCGCG GGGCTACGTC
CCCCAGCCGG TCAAGGTGCC GGCGGGTGAA GGGCCGGTGG TGCTGGGAAT AGGCGGGGAG
ATGAAGAACA CCTTCTGTCT TCTGCGGCGG GGCGAAGCCT TCTTGAGCCA GCACATAGGG
GAGCTCGACA CGGTGGAAGG GGAGGAGAAC CTGAAGACCA GCCTGGAGAG CTTCACCAGG
CTTCTGGGGG TGAAGCCGGA AGTCGTAGGC TACGACCTGC ACCCCGACTA CCGCTCTTCC
CGCCTGGCGC GGGAGCTCGA GGCCAAGTAC CGCTTCGCCG TCCAGCACCA CCACGCCCAC
ATGGCGTCCT GCTTGGCCGA AAACGGGGCC GAGGGACCTG CCGTCGGAGC GATATTGGAT
GGGACCGGCT ACGGTACCGA CGGGTGCCTG TGGGGCTTTG AGATCCTAAC CGGCGATTTC
AGCCGGTTCG AGCGCCATTA CCACCTGGCC TACACTCCCC TCCCGGGTGG GGAGGCGGCC
ATAAAGCACC CCTGGCGGAT AGCCGTCTCC TATCTCCTCA CTTTCCTGGG GGAGGAGGGA
CGGGAGTGGT CCCGCCGGCT CTTCGGCGCC AAGGGGCAGG AGCTTTCCCT GCTGGAAAAA
ATAATCGCTC AGCGGGTAAA CGCCCCGCTG GCTTGCGGCT GCGGCCGCCT CTTCGATGCG
GTGGCCGCCC TTTTGGGGGT GAGGTGGGAG ATAAGCTACG AGGGGCAGGC GGCGATAGAG
CTGGGGGAGA TGGCCCTGCC GCCGGAAGAA GGCAAGCACC TTCCTCCCTA CCCCTTCGCC
TTCGAAGGGG AGGAGATATC CCCCGCTCCT CTCTTCCGGG AGATCCTAGC CGATCTGGCG
CGGGGAGAAG ATAAACGGAT CATCAGCACC CGTTTCCACA ACACCGTGGT TGCCATGGTA
CGGGAGGCGG TGGCCCGGGT GGTAAGAAGT ACCGGGCTTG CCACCGTGGT CTTGAGCGGC
GGGAGTTGGC AGAACCCTTA CCTTTTTGTC CTGGGCAGGG AGGCCCTGGA AGAACTGGGG
CTTAAGGTGC TTCATCACCG GCAGGTGCCG GCTAACGACG GTGGCCTGTG TTTAGGCCAG
GCAGCCATAG CTTACAAGAG GTGGTGGGAA GAGTGTGCCT AG
|
|---|
| Protein sequence | MVPVAGRAAS AEKGGRVRYR LTVKGTVQGV GFRPFVYHLA VKYGLKGFVR NDAQGVYVEV
EGGEEEVKRF CKELCQHPPR LARIAELLVE VLPPAGYSAF EIDLSRAAPE KEALVPPDVA
ICPDCAREIF DPEDRHYLYP FTNCTNCGPR FTIVRELPYD RARTSMASFP MCPDCSREYH
DPLDRRFHAQ PVACPRCGPQ LKLFDAQGRS VEGDWRENCW ELLRAGKILA IKGLGGFHLC
CDALEPRVVA LLRRRKRRPH KPLAVMARDL EVVRRFCELG PVEEELLTSP AAPIVVLKRR
PEAGLPEELA PGLKTLGVML PYTPLHLLLL QGPLPLLVMT SGNRSGLPLC KDNERAWEEL
GDIADYFLIH NRDIVNRCDD SVVAVMGGIP AFYRRSRGYV PQPVKVPAGE GPVVLGIGGE
MKNTFCLLRR GEAFLSQHIG ELDTVEGEEN LKTSLESFTR LLGVKPEVVG YDLHPDYRSS
RLARELEAKY RFAVQHHHAH MASCLAENGA EGPAVGAILD GTGYGTDGCL WGFEILTGDF
SRFERHYHLA YTPLPGGEAA IKHPWRIAVS YLLTFLGEEG REWSRRLFGA KGQELSLLEK
IIAQRVNAPL ACGCGRLFDA VAALLGVRWE ISYEGQAAIE LGEMALPPEE GKHLPPYPFA
FEGEEISPAP LFREILADLA RGEDKRIIST RFHNTVVAMV REAVARVVRS TGLATVVLSG
GSWQNPYLFV LGREALEELG LKVLHHRQVP ANDGGLCLGQ AAIAYKRWWE ECA
|
|---|
| |