| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1993 |
|---|
| Symbol | |
|---|
| ID | 8492000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1996188 |
|---|
| End bp | 1997591 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646359981 |
|---|
| Product | protein of unknown function UPF0236 |
|---|
| Protein accession | YP_003239921 |
|---|
| Protein GI | 260893824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000779773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTA TAAAGCAGAT TTGGGAGAAG TTCCAGAGGG TAGCGGAGCT AACGTTAGAG
GTTCTGGAGG AAGGGATCGA CCTTTTAAGC TTCGAGGAGA AGCTCTGGCA GGAGCTTAAA
AGCTTAGGAA AAGAGATCCT GAGGGAAGTT CTGGAGGCAA AAGACGCTTA TTTACGGGAG
CACCGGGAAA AGCGGCCTGG CTGGCAAGTA GAGCGGAGGA ATGATCCCAA GGAAGTGCTC
ACCCTTTTCG GTCTGGTCAG CTACAAGCGG ACCTATTACC GGCACAAAGA GACTGGGGAG
CGGGCATACT TAATAGACCG TTTGGTGGGT TACGGGCCGC ATACGCGGGT TGACCCTCTG
GTCAAGGCAC AAGTTTTAGA AGAAGCAGTA GAGCTTTCTT ACCGGAAAAG TGGGGAAAGG
GCAGGAAAAG GCAACCCGGA GGTTGTGCTG AGTGGTGAGG CTGTGAAAAA GGTAGTTCAC
AACTTCACCC CTGCAGAACT GCCCGAACCA CCCAAAGAGA AGCGCCGGGT GAAGGTCCTT
TACGTAGAAG CGGACGAAGA CCACGTAGCT GGCCAGGACA AGAAGAGCCA CCTACCTCGT
CTTGTTTACA TACACGAAGG GAAAGAAGAG GTGGGGAAAG GGCGGTATAA GCTTAAGCGG
CCTTACTACC TGGGAGGGCT TTATCCGGAC ACGGATGAAC TGTGGCTGGA TGTTCTAACT
TACATTGAGG AGCATTATGA GCTACATGAT ATTGAGCGGA TCTATCTTTG TGGAGACGGG
GACAGGTGGA TAAAGAGGGG TCTGGAGTTT TTACCGAAGA GCGTATTTGT TCTGGACCTT
TTCCACCTGG ATAAATACCT TGTGGCCGCT TTAGGAAAGG ACAAAGAGGC ATATGGAGAG
ATTTGGGCAG CCTTGAGGCG TGGTGATCGG GTGGGGGTAG AGAAGGTACT GAAGGGAGCG
GCGAGGCAGG CGGAGACACC TGGCCGGAGG AAGGCGGTGC GTGATTGTCG GCGCTACATA
AATCAGAACT GGGAGGGGAT AATGGCTTAC AAGCTTTACC CGGAGGCGCA GTTAGGGGTG
AGCGCGGAGG CGCACGTAAG TCATCTCTTC TCGGCACGGT TATCATCCCG ACCGATGGCT
TGGAGTGCTT GTGGGGTAGA CCGGATGGCC CGGTTGCGGG TGGCGAAGGC GAATGGTGTT
TCCTTGCGGG AGCAATATGT AGCCCGATGG AGGGAGGGCT TAAAGGCTTT AGAGATCGAT
AAGGCAGCCA TTGAGGAAGA GAGGCAGAGG CTAAGGAAAG TATCGGGTGA GGTGTTCGAT
AATCTTCCCG CATTACGGGG TCCGGTAACG TCATTAACCA GAGCCCTCAA AGCTTTGAGC
CGGAACATCG ATCTTCCCTG GTAG
|
|---|
| Protein sequence | MQIIKQIWEK FQRVAELTLE VLEEGIDLLS FEEKLWQELK SLGKEILREV LEAKDAYLRE
HREKRPGWQV ERRNDPKEVL TLFGLVSYKR TYYRHKETGE RAYLIDRLVG YGPHTRVDPL
VKAQVLEEAV ELSYRKSGER AGKGNPEVVL SGEAVKKVVH NFTPAELPEP PKEKRRVKVL
YVEADEDHVA GQDKKSHLPR LVYIHEGKEE VGKGRYKLKR PYYLGGLYPD TDELWLDVLT
YIEEHYELHD IERIYLCGDG DRWIKRGLEF LPKSVFVLDL FHLDKYLVAA LGKDKEAYGE
IWAALRRGDR VGVEKVLKGA ARQAETPGRR KAVRDCRRYI NQNWEGIMAY KLYPEAQLGV
SAEAHVSHLF SARLSSRPMA WSACGVDRMA RLRVAKANGV SLREQYVARW REGLKALEID
KAAIEEERQR LRKVSGEVFD NLPALRGPVT SLTRALKALS RNIDLPW
|
|---|
| |