| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1953 |
|---|
| Symbol | |
|---|
| ID | 8491958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1958118 |
|---|
| End bp | 1958708 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359940 |
|---|
| Product | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| Protein accession | YP_003239882 |
|---|
| Protein GI | 260893785 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.620074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGAAGA TAGTGCTGGC CAGCCGCAAT GAAGGGAAGT TGCGGGAGTT CAAAGCGCTA
CTTTCTCCTC TAGGCTGGGA AGTGATCCCC TTAACCTCTT ACCCCGACCT CCCGGAGATA
GAAGAGACGG GAGAGACTTT CGCCGCCAAT GCCCTCATCA AAGCTCGGAC CGTGGCCTTC
TATACGGGCG AGGTGGCGCT GGCCGACGAC TCCGGTTTGG AGGTGGATTA TCTCGAGGGC
GCCCCCGGTG TCCGCTCCGC CCGCTTCGCC GGTCGCCAGG GAGACGACGC CGCGAATATA
GCCCTGCTTT TAAAGCTTAT GGAGGGTGTG CCCTGGGAGA AGCGCAAAGC CTGCTTCCGC
TGCGTCATCG CCGTGGTCAC CCCTGAAGGC AAGGAGTACC TAGCCGAAGG AACTGTAGAA
GGCTATATCC TGGAAGAGCC GCGAGGAAAA GGGGGTTTCG GCTACGATCC CGTTTTTTAC
CTGCCGGAGT ACGGCCAGAC TTTCGCCGAG CTCCCTTTGG AGGTAAAGAA CCAGATAAGT
CACCGTGCGC GCGCCTTGGC CAAGATAAAG GAGATTTTGC GCGTGTATTG A
|
|---|
| Protein sequence | MRKIVLASRN EGKLREFKAL LSPLGWEVIP LTSYPDLPEI EETGETFAAN ALIKARTVAF
YTGEVALADD SGLEVDYLEG APGVRSARFA GRQGDDAANI ALLLKLMEGV PWEKRKACFR
CVIAVVTPEG KEYLAEGTVE GYILEEPRGK GGFGYDPVFY LPEYGQTFAE LPLEVKNQIS
HRARALAKIK EILRVY
|
|---|
| |