| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1952 |
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| Symbol | |
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| ID | 8491957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1957373 |
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| End bp | 1958149 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646359939 |
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| Product | ribonuclease PH |
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| Protein accession | YP_003239881 |
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| Protein GI | 260893784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00230423 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCGGCTAG ACGGGCGGGG AACGGGGGAA CTGAGGCCGG TAAAGATAAT CCCCGGCTAC
AGCAAGTACG CCGAGGGCTC TTGTCTTATC GAAATGGGAG ACACGCGGGT CCTCTGCACC
GCTTCCATCG ACGACAAGGT GCCCTCCTTT CTCAAAGGCA CCGGCAAAGG TTGGGTGACG
GCCGAATACG GTATGCTTCC CCGGGCCACC GAGAGCCGCA ACCTGCGTGA GGTGACCAAG
GGGAGGCCCA GCGGCCGGAC TTTGGAAATC CAGCGGTTAA TCGGCCGCTC TTTGCGGGCA
GCGGTGGACC TGGAGGCTCT AGGAGAACGT ACCATAATCG TGGACTGCGA TGTGCTCCAG
GCCGACGGCG GCACCCGCAC AGCTGCCATC ACAGGAGGGT TTGTAGCTTT AGTCTACGCT
CTGGACTGGT TACGTAACGA GGGGGCGATC GAGTCTCTAC CGGTAAAAGA TTTAGTAGCC
GCTGTGAGCG TGGGCAAGGT CAAGGACGCT TATCTTTTGG ACCTCACCTT CGCTGAAGAC
TCCATGGCCG AGGTGGACCT CAACGTGGTG ATGACCGGCA AAGGAGAGTT GGTGGAGGTG
CAGGGGACGG CAGAAGGAAA GCCTTTCACC CGCGAGGAAC TGAACTTGAT GCTCGACCTG
GCCGCTCAGG GTGTGAGTGT GCTCATTGCT AAGCAGCGGG AAGCTCTAGG AGTGCTGGCG
AGCTTCATCG GGAGGCAAGA TGAAAGTGCG GAAGATAGTG CTGGCCAGCC GCAATGA
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| Protein sequence | MRLDGRGTGE LRPVKIIPGY SKYAEGSCLI EMGDTRVLCT ASIDDKVPSF LKGTGKGWVT
AEYGMLPRAT ESRNLREVTK GRPSGRTLEI QRLIGRSLRA AVDLEALGER TIIVDCDVLQ
ADGGTRTAAI TGGFVALVYA LDWLRNEGAI ESLPVKDLVA AVSVGKVKDA YLLDLTFAED
SMAEVDLNVV MTGKGELVEV QGTAEGKPFT REELNLMLDL AAQGVSVLIA KQREALGVLA
SFIGRQDESA EDSAGQPQ
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