| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1946 |
|---|
| Symbol | |
|---|
| ID | 8491951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1950076 |
|---|
| End bp | 1951935 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646359933 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003239875 |
|---|
| Protein GI | 260893778 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTGCAG TAGAGGAACT CTTGCCCCGG GTAAGTAAAC CGGCTCGCTA CGTGGGTGGG
GAATATAACT CGGTGCGCAA GAACTGGGAT GAGGTAGAAG TAAAGATAGC CTTTGCCTTC
CCCGATGTTT ACGAGGTGGG GATGTCCTAC CTCGGCTTGC AGATACTTTA CCACGCGGTC
AACTCCCGGC CGGACGCCCT GCTGGAGCGC GTTTTTGCTC CCTGGCCGGA CATGGAGACC
TTGTTGCGCT CCAAGGGAAT TCCCCTCTTT ACCCTAGAGT CGCACCGGCC GGTTAAGGAC
TTTGATATCC TAGCCATCAC CCTGCAGTAT GAACTTACCT ACACCAACAT CCTCAACCTG
CTCGACCTGG CGGGAATCCC ACTTCTGGCT CGAGAACGGG GAGAGGACAA GCCCCTGGTG
GTGGGGGGAG GGCCGTGCGC CTTTAACCCC GAGCCACTGG CTCCTTTCTT TGACCTTTTT
GTTCTGGGCG ACGGGGAGGA GGCCGTTCAC GAGCTCATCG ATCTCTGGCG GGAGGTTAGG
CGGCAAGGAG GAAGGAAGCA GGATTTCCTG CGCGAGCTTG CCCGCCGCCC CGGCTTTTAC
GTCCCTTCTC TTTACCGGCA GGAAGGTAAA GGGGTGGTTC CCCTTCATCC TGATGTGCCC
GCGCGGGTCA GAAAAAGGGT GGTGGCGGAT CTCGACCAGG CGCCCTTTCC TCCTAGGCCG
GTAGTCCCCT GGGTGGAAGC GGTACACGAC CGGGCGATGA TCGAAGTTTT TCGTGGCTGC
ACACGCGGCT GCCGCTTCTG CCAGGCGGGG ATGATCTACC GGCCGGTACG GGAAAGGACC
GTGCCGATTT TAGTGCGGCA AGGGGAGGAA GTGATTCGGC ACACTGGCTA CGACGAATTG
TCCCTAACTT CTCTCAGCAC CGTGGACTAT ACCTGCCTTC TGCCCCTCTT GGCCGGTCTT
AAAAAGCTCC GGCTTTCCCA CCCCTTGACT GTATCTCTCC CCTCTTTGCG GGTGGATGCT
TTTGCCGTAG GGGTGGCCGA GGGCTTGACG GCGGGGAGGA AGTCTTCCCT TACCTTCGCC
CCGGAGGCGG GCACGCAGCG GCTGCGCAAC GTCATCAACA AGAAAGTAAC GGAGGAAGAT
TTGCTGCGGG CGGCTGAGGC CGCCTTTAAG GCCGGCTGGC AGCGCCTCAA GCTTTACTTC
ATGATAGGCC TCCCTACCGA GACGGAAGAG GATATCAAAG GGATTGGGGA GCTGGTCCGG
GCGGTGCTGG CGGTGGGAGA GAGGTGCGGG GTACCGCACG GGCGCCTGCG GGTGGCAGTA
AGCGTGGCTT GCTTCGTGCC CAAGGCTCAC ACTCCTTTTC AGTGGGAGCC GCAGATAAGT
CAAGAGGAGC TGCGGGAGAG GCTTAGGCTT CTGCAGACGG AGTTACGGCG GGAAAAGAGG
GTGGAGCTTA GCTGGCATGA ACCCCGCATG AGTCTGCTGG AGGCGGTTTT CGCCCGGGGA
GACCGGAACC TCGCTCCAGC TCTCTTGGAG GCCTGGCGGC GCGGGTGCCG CTTCGACGGC
TGGCGGGAGC ACTTCTCCTT CCCCCGCTGG GAGGAGGCTT TTACGGCGGC GGGAGTAGAT
CCTTACGCTT ACGCCTACCG CCGTTACGCT TATGACGAGG TCCTTCCCTG GGACCACCTG
GATGCGGGAG TGAGCAAGAA GTTTCTGGTG GCGGAGCACC AGCGGGCCTA CCGGGGAGAA
ACGACCCCGG ACTGCCGGGA GGGTAAGTGC GTGGGCTGCG GGGTCTGCCC AAGCCTGGGG
GTGCGCCCCG TGCTGGCGGA GGAGGGAAGG GATGTATCGC TATCGACTGG CCTTTCGTAA
|
|---|
| Protein sequence | MPAVEELLPR VSKPARYVGG EYNSVRKNWD EVEVKIAFAF PDVYEVGMSY LGLQILYHAV
NSRPDALLER VFAPWPDMET LLRSKGIPLF TLESHRPVKD FDILAITLQY ELTYTNILNL
LDLAGIPLLA RERGEDKPLV VGGGPCAFNP EPLAPFFDLF VLGDGEEAVH ELIDLWREVR
RQGGRKQDFL RELARRPGFY VPSLYRQEGK GVVPLHPDVP ARVRKRVVAD LDQAPFPPRP
VVPWVEAVHD RAMIEVFRGC TRGCRFCQAG MIYRPVRERT VPILVRQGEE VIRHTGYDEL
SLTSLSTVDY TCLLPLLAGL KKLRLSHPLT VSLPSLRVDA FAVGVAEGLT AGRKSSLTFA
PEAGTQRLRN VINKKVTEED LLRAAEAAFK AGWQRLKLYF MIGLPTETEE DIKGIGELVR
AVLAVGERCG VPHGRLRVAV SVACFVPKAH TPFQWEPQIS QEELRERLRL LQTELRREKR
VELSWHEPRM SLLEAVFARG DRNLAPALLE AWRRGCRFDG WREHFSFPRW EEAFTAAGVD
PYAYAYRRYA YDEVLPWDHL DAGVSKKFLV AEHQRAYRGE TTPDCREGKC VGCGVCPSLG
VRPVLAEEGR DVSLSTGLS
|
|---|
| |