| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1922 |
|---|
| Symbol | |
|---|
| ID | 8491927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1928410 |
|---|
| End bp | 1929357 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359910 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_003239852 |
|---|
| Protein GI | 260893755 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TTTGGCCGTT GGTGGTGATC ACCGGCCCCA CCGCCACGGG CAAAACGGCG
GTGGGGATAG AGGTGGCTCT GCGGCTTGGC GGGGAGATCA TCTCGGCCGA TTCCATGATG
GTTTACAAGG GGATGGACAT CGGCACGGCC AAGCCTTCTC TGGAGGAGCG CAAGGGCGTG
CCCCACCATC TCATCGATGT GGTGGAGCCC CACGAACACT TTAGCGTGGG TGCCTTCCAG
GCCCTGGCCC GGAAGCTCAT CGAGGAGATA CACTCTCGGG GGAAATTGCC CCTGCTGGTT
GGGGGCACGG CCCTTTATAT CCGGGCGGTG ATCGACGGCT ACATTTTCAC CGTGAAGGCG
GACAAAGAGC TGCGCCAGAG GCTTTTAGAG GAGGCCCAGG AGAAGGGCAC GACTCACCTG
CACGCCCAAC TCCAAGCTAT AGACCCGCAG GCAGCGGCCA AGATCCATCC TCGCGACCGC
AAGCGCCTCG TCCGCGCGCT GGAAATATAC TACCAGACGG GCAAGCCCCC CTCGGAGGTC
ATGAAAAAGG AGCCGCCCCC CTATGACGTC TTGATGTTCG GTCTTAATCT GGCGCGGGAG
GAACTTTACC GGCGTATAGA GCAGCGGGTG GACGCCATGC TGGCGGCAGG GCTGGTGGAA
GAAGTGCGCC GGCTTCTGGA GCAGGGGGTC CCTCCTCAAG CTACCTCCAT GCAGGGTCTA
GGCTACAAGG AGATAGCCGC TTATCTCAGA GGAGAAATAA GCCTCGAGCG GGCGGTTTAC
CTCATCAAGC GCAACACCCG CCGTTTTGCC AAAAGGCAAC TCACCTGGTT CCGGCATGAC
CCGCGCATCC GCTGGCTCGA TGTGGCCCAG TACAAAGGGA TAGAAGATCT GGCGGAGGAA
ATAGTGCGCC AGGTGCAGGA TTATTTTGGC TTTGAGCGAA AATCCTAA
|
|---|
| Protein sequence | MKKLWPLVVI TGPTATGKTA VGIEVALRLG GEIISADSMM VYKGMDIGTA KPSLEERKGV
PHHLIDVVEP HEHFSVGAFQ ALARKLIEEI HSRGKLPLLV GGTALYIRAV IDGYIFTVKA
DKELRQRLLE EAQEKGTTHL HAQLQAIDPQ AAAKIHPRDR KRLVRALEIY YQTGKPPSEV
MKKEPPPYDV LMFGLNLARE ELYRRIEQRV DAMLAAGLVE EVRRLLEQGV PPQATSMQGL
GYKEIAAYLR GEISLERAVY LIKRNTRRFA KRQLTWFRHD PRIRWLDVAQ YKGIEDLAEE
IVRQVQDYFG FERKS
|
|---|
| |