| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1914 |
|---|
| Symbol | |
|---|
| ID | 8491918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1919839 |
|---|
| End bp | 1921320 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359901 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003239844 |
|---|
| Protein GI | 260893747 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000299589 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGTTCA AGACCAGGAA GCCCGCCGAC ATGATAACCG TGCCCGGCCG GATATACCCG
GATGAGACGG CAAAGGAAAG GCTCATCTCC TTCATGCGCC GGTTCCAGGC GGCAAAGCGC
ACCGCCTACC AGGCGCTGAG ACGGGGAAAG GAACCGGAAG AAATCGTCAA GGACCTCTAC
CGGAAGTTCT TCCCCAACGC CCGCTGGTGC CAGTGGGCGC TGGAAGACGC AAAGGCCACC
ATCGAAAGTC AAAAGGAACA GGTCAAGATG CACGTCTCGG ACCTGGAGGC CAAGATAGAG
AAGTCCGAGG AGAAGCTCAA GCGCACCAAA AACGAACTTC ACCGCCAGGG GATACTGGCC
CGCGTCGCGA GGCTGCGCGC GAAGCTGGAG TACTGGAAGG GTTTCCTGGA ACGGGACGAA
GTCCCTCCCG CCGTCTTCGG CGGGAAGAAA AACCTGCTGC TCCTCCAGGA AGGGAAGCTC
TCCAAGGAGG AGTGGCGGGA GCTGAGGTCC AACGCCTTCT ACTCCGTGGG CCAGGCCAAC
CAAAAGGGGC TGGAGAGCCA GTACGGCAAC GCCAACACGG AAATCGTGTA CGACGAGGCA
ACAGACTCCT TCCGGCTCAA CGTGTACGTA CCGCCGGAGC CAGGGGACGA GAGCGGCAGG
CCGAGGCGGG ACGAAGACTG GGTCTCCGTG CCCCTGGAGA TTCCTGCCTG CTACCGGGAC
CTTCTCCTCC GTTGCCTGGC CGGGGGCGGG CCGTACTCGG TGCGGGTAGT GCGGAAGGCG
GGCAGGTTCG ACTGTCTCGT TTCCTTTTCC CTGCAGGACG AAGCGGAAGT GGACAGGACC
TCCCTCATGG CCGGGATGGA CTTGAACCCC GACGTGGTGG CGGTGACCGT CGTCCTGCCG
GACGGGAACT TCAAGGTCTC CCGCTGTTTC TGGTGCCACG ACCTGGTCCA CGCTTCGCGC
GAGAAGCGGG AGTGGATCGC GGGCAACCTG GCCAAAGAGG TGGCCAACTG GCTGGAGTCC
CTGGGCGTGA AGCAGGCTGC CTTAGAGGAG CTTTCCTTTG CCCAGGACCA CGACACCGAC
AGGGCGTTCA ACCGGATCAC GCACAACTTC TGCAAGAAGC TCCTCTTCAA CCGCATCGTC
GTGGCTTTAA GGAAGCGCGG CATCGCGGTG TTCATCGTGC CCGCCCACTT CACTTCGCTC
ATAGGCTTCT TCAAGTACTC TGAGACTTAC GGGCTTAACA CCCACCAGGC GGCGGCTCTA
GTCGTGGCGC GCCGGGCGCT GGGCTTTAAA GAAAAAGTGC CGAAGGCCCT CGTCCAGAAG
CTTCTCGGGC GTTCGCCGAT GGAAGGATGG ACGCACTGGA AGCTCTGGGG CAGGCTCTTT
GGCGTGCTCA GGGCAGCCCG GAAGAAGGTC TCCCGCTACT TCAACACCAG AGCCTTCACT
CCTTCCGCCT GGCTGGAGCA CATCTTCGCC AGGGCGGGCT AA
|
|---|
| Protein sequence | MKFKTRKPAD MITVPGRIYP DETAKERLIS FMRRFQAAKR TAYQALRRGK EPEEIVKDLY
RKFFPNARWC QWALEDAKAT IESQKEQVKM HVSDLEAKIE KSEEKLKRTK NELHRQGILA
RVARLRAKLE YWKGFLERDE VPPAVFGGKK NLLLLQEGKL SKEEWRELRS NAFYSVGQAN
QKGLESQYGN ANTEIVYDEA TDSFRLNVYV PPEPGDESGR PRRDEDWVSV PLEIPACYRD
LLLRCLAGGG PYSVRVVRKA GRFDCLVSFS LQDEAEVDRT SLMAGMDLNP DVVAVTVVLP
DGNFKVSRCF WCHDLVHASR EKREWIAGNL AKEVANWLES LGVKQAALEE LSFAQDHDTD
RAFNRITHNF CKKLLFNRIV VALRKRGIAV FIVPAHFTSL IGFFKYSETY GLNTHQAAAL
VVARRALGFK EKVPKALVQK LLGRSPMEGW THWKLWGRLF GVLRAARKKV SRYFNTRAFT
PSAWLEHIFA RAG
|
|---|
| |