Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1877 |
Symbol | panB |
ID | 8491881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1875796 |
End bp | 1876638 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646359865 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_003239808 |
Protein GI | 260893711 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACAAGG TAACCACGGC CGATTTTAGG CGCTGGAAAA TGGAGAAGCG CCCCATCACC ATGCTCACCG CCTACGACTA CTCCTTGGCC CGCCTGGTAG ACGAAGCGGG CATCGACGCC ATCCTGGTAG GAGACTCGGT GGGTAACGTG GTGCTAGGGT ACCCCAACAC CCTGCCAGTG ACCATGGAGG AGATGTTGCA CCATACCAGG GCAGTGGTGC GGGGGGTAAA ACGGGCCCTG GTAATTGGGG ATATGCCCTT CCTCTCTTAC CAGGTGAGTA AAGAAGAGGC CATAAGGAAC GCCGGGCGCT TTCTAAAAGA GGCGGGGGCG GAAGCGGTGA AGCTGGAGGG GGGAGAAGAG ATTGCTCCTA CGGTGGAAGC TTTAGTTAAA AGTGGCATCC CGGTGATGGG GCACATAGGG CTTACTCCCC AGTACGTCCA CCAGCTGGGT GGGTACCGGG TACAGGGGAA GGAAGCGGCG GCAGCCCGTA AGCTTATCCG CGATGCCCAG GCGCTAGCGG AGGCAGGGGT CTTCGCCCTG GTGCTGGAGT GCGTGCCCCA GGAGGTGGCC CAGGAAATCA CCGCTTCTTT ACCCGTGCCC ACTATAGGGA TAGGGGCAGG TCCCCATTGC GATGGGCAGG TGCTGGTCAC CCACGATCTT CTGGGGCTGT ATGGAGGCTT TACCCCCAAG TTCGTCAAGC GCTATGCCAA CCTGGTGGAG GAGATAAAGA AGGCCCTGGC TGCCTTCCGG GAGGAGGTGC AGAACCGGGT CTTTCCCGGG CCAGAGCACT CTTTCTCCAT GGCGCCAGAA GAGTACCGGG CCTTCAAGGA GGGGAAAGAA TGA
|
Protein sequence | MNKVTTADFR RWKMEKRPIT MLTAYDYSLA RLVDEAGIDA ILVGDSVGNV VLGYPNTLPV TMEEMLHHTR AVVRGVKRAL VIGDMPFLSY QVSKEEAIRN AGRFLKEAGA EAVKLEGGEE IAPTVEALVK SGIPVMGHIG LTPQYVHQLG GYRVQGKEAA AARKLIRDAQ ALAEAGVFAL VLECVPQEVA QEITASLPVP TIGIGAGPHC DGQVLVTHDL LGLYGGFTPK FVKRYANLVE EIKKALAAFR EEVQNRVFPG PEHSFSMAPE EYRAFKEGKE
|
| |