| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1869 |
|---|
| Symbol | |
|---|
| ID | 8491873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1868124 |
|---|
| End bp | 1869806 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359858 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003239801 |
|---|
| Protein GI | 260893704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000405396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGAGAA AGCACAAAAG GGAGAAGTTT AGCTTTACCG TCTGCGGGGA GTTCTTCCCG
GAAGTCTACC CCGCCTTCAG GTCGGCGAGA TGGGCCCGGG GCGAGGAAGA CCCACTGGAG
ACGGAGATGC GGCTCTTCTG CGCCTGCCAC CGCTGGGCCT TCAACCGCCT CTTGGAGGGT
GTCTCCCGGG ACGAAATTAA AAAGCGCGGC CAGAAGCTTT TCGGGCTCAA CTCCCGGTAC
GTGGACGATG CCAGGCTTAG AGCCCAGGCC CTGCTGGACT CCCAGAAAGA GCTCCTGGCA
CAGGAAGTAG AGGAGACGGA AAAGAAGCTG AACCGGGCCA GGAAGAAGCT GGGCTTAGCC
ATGAAGAAGC TGGCCAGGGC CGAAAAGAAG GGCGCCGCCC CTGCCGTGCT GGAAAAGCTG
CGCCTGGCGG TCAAGGGCCG CGCTTCACGT GTAGCCTCCC TGGAAAAGAA GCTGGCCGAA
CTCAGATCCC ACCTGGAGAG CTCTACCTTA CCCAAGGTGG TCTTCGGGGG TAGGAAGCTC
TGGAAGAGGG TTTGCAAAGG CCGGGCCACG CGGGAGGAGT GGCGGCACGC CCGCAAAAAC
CGCCTCTACT CCCGTGGGGA CGAAGAGAAA GGCGGCAACC CGAACATCAA AGTCTTCCAC
CGGAACGGGG AGTTCTACCT GTCGGCGACC ATCTCCCACC TCTCGGAGAA GGTGGGTGAG
GACGAGCTTG GCCGCCCGAA GATGAGCCGC GCCCCGAGGG TGGAGGGCAG GCTCTGGCTG
CCAGAGAAGC ACCGGAGCTT AGTGCGAATA TGGCTGGCCA TGAAGCTGCC CTACACGGCG
GAACTGATAC GCACTCTGGA TGGACGGTAT TTGGTCCACC TGACCTTCGA CCTGGGTGGG
GTGCGAGAGC CTGACTTTGC TAAAGGTTGT TTGGCCCTGG ACACGAACCC CGACGGCGTA
GCTTTATGCA GCGTCGGTCC CAACGGCCAG CCGGAGCCCT GGCCGGAAGG CTTCGGCGTC
CCCTACCCAG GCAACCTGGG CAAGTACGAG GGGGAGTTCC AGGTCATCAC CTACCCCTCG
GGCTTCATGT ACATTAGGGT GCCCGACCTG ACCTACGCTT CCGGCTTCCG GCGGGACTAC
CTGATAGGCG TGCTGGCCAA GGTGGTGGTG GACATAGCCC TCTTCCTGGG CAAACCCGTG
GTCCTGGAGG ACTTAGACTT CGGCAAGGAC CGGCTGGCCG ACCTGAAAAA GTTTAACCGC
ATAGCTTCCA ACTTTCCCTA CGCGAAGATG GTGGAGGCGG TGTGCCGGAG GGCGGCCAAG
GAAGGTGTGC CCTTTAAGCT GGTACCGCCG CGGCACACCT CCACCATCGG GTACTGGAAG
TACGCGGGGC GGTACGCGGT CCCGGTGCAC TGCGCGGCGG CACTGGTGAT CGGCCGCCGG
GCCATGGGCT TCAAGGAGAG GATCACGCGG GAAATTAAGG AGTTCGTGCT CCGGGTCAAA
GAGGAGCTCG CTTCCGGTGA TTCCTTGCCT GGGGAAGGAA GAGGGATGAC CCGGAAGGTC
AGGGCCCTGC TTGCCCGGCT GGAAAAGAAG CTTCCCCTGC ACAACGGGCT TGCCCGCTGG
CAGCAGGAAA GCTTCAGTTC CTGCTGGCGC GAGCTTAAAA TGCTGGCTTT GGCTTTCCGG
TGA
|
|---|
| Protein sequence | MRRKHKREKF SFTVCGEFFP EVYPAFRSAR WARGEEDPLE TEMRLFCACH RWAFNRLLEG
VSRDEIKKRG QKLFGLNSRY VDDARLRAQA LLDSQKELLA QEVEETEKKL NRARKKLGLA
MKKLARAEKK GAAPAVLEKL RLAVKGRASR VASLEKKLAE LRSHLESSTL PKVVFGGRKL
WKRVCKGRAT REEWRHARKN RLYSRGDEEK GGNPNIKVFH RNGEFYLSAT ISHLSEKVGE
DELGRPKMSR APRVEGRLWL PEKHRSLVRI WLAMKLPYTA ELIRTLDGRY LVHLTFDLGG
VREPDFAKGC LALDTNPDGV ALCSVGPNGQ PEPWPEGFGV PYPGNLGKYE GEFQVITYPS
GFMYIRVPDL TYASGFRRDY LIGVLAKVVV DIALFLGKPV VLEDLDFGKD RLADLKKFNR
IASNFPYAKM VEAVCRRAAK EGVPFKLVPP RHTSTIGYWK YAGRYAVPVH CAAALVIGRR
AMGFKERITR EIKEFVLRVK EELASGDSLP GEGRGMTRKV RALLARLEKK LPLHNGLARW
QQESFSSCWR ELKMLALAFR
|
|---|
| |