| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1860 |
|---|
| Symbol | |
|---|
| ID | 8491864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1860355 |
|---|
| End bp | 1861320 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646359850 |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_003239793 |
|---|
| Protein GI | 260893696 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3958] Transketolase, C-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CCATGGCTAC CCGCGAGGGG TACGGCCAGG CTCTGGTGGA GCTCGGCCGG
CGCAACGAGC GGGTGGTGGT CTTAGACGCC GATCTCTCCA AGTCCACCCA GACCGTCCGC
TTTGCCAGGG AGTTTCCCGA GCGCTTCTTC AACGCCGGAG TGGCGGAGGC CAACCTCATC
GGTATGGCAG CCGGTCTGGC GGCATCGGGT TTCATCCCCT TTGCCTCTAC CTTCGCCATC
TTTGCCACCC AGCGGGCCTA CAACCAGATC TTTCAGTCGG TGGCCTACCC GGGCCTCAAC
GTCAAGATAG CGGCCAGCCA CGGGGGAATT ACGGTAGGGG AAGACGGAGC CTCGCACCAG
GCCATAGACG ATCTGGCCCT GATGCGTGCT CTACCGGGCA TGACGGTGCT GGTACCGGCT
GACGCGCACG AGGCCTACCA GGCTACCCTG GCGGCGGCGG AGTGGGAGGG TCCCGTGTAT
ATCCGCCTGG GGAGGCCGAC AGTACCCCTC ATCACCTCTC CCGACAAACC CTTCACCATC
GGCCGGATTC AGGTGCTGCG GGAAGGGGAG GACGTAACCC TGGCCGCCTG CGGCCACATG
GTAAAAGTGG CCCTGGAGGC AGCGGAGGAG CTAAAGCGTA AGGGGTACGG AGCGGCGGTG
CTGAACGTCT CTACCTTGAA GCCCCTGGAT CGGGAGACCC TGCTTCACTG GGCTTCCCGC
ACGGGGGCGG TGGTAACTGT GGAGGAGCAC AGCATAATCG GGGGTTTAGG GAGCGCGGTG
GCCGAAGTGC TGTCAGAGGA GTGCCCGGTT CCCTTGATTC GCTTGGGGGT GCGGGACACC
TTCGGCCAGT CCGGCAAGCC GCACGAGCTC CTTCATCACT ACGGCCTCAC CGCGGGTAAT
GTGGTAGAGG CGGCCGAGAA AATCATAAAG CGAAAGGGTG GTAGAAATGG CCAAAGTGAC
GCTTAG
|
|---|
| Protein sequence | MTKPMATREG YGQALVELGR RNERVVVLDA DLSKSTQTVR FAREFPERFF NAGVAEANLI
GMAAGLAASG FIPFASTFAI FATQRAYNQI FQSVAYPGLN VKIAASHGGI TVGEDGASHQ
AIDDLALMRA LPGMTVLVPA DAHEAYQATL AAAEWEGPVY IRLGRPTVPL ITSPDKPFTI
GRIQVLREGE DVTLAACGHM VKVALEAAEE LKRKGYGAAV LNVSTLKPLD RETLLHWASR
TGAVVTVEEH SIIGGLGSAV AEVLSEECPV PLIRLGVRDT FGQSGKPHEL LHHYGLTAGN
VVEAAEKIIK RKGGRNGQSD A
|
|---|
| |