| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1854 |
|---|
| Symbol | |
|---|
| ID | 8491858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1854446 |
|---|
| End bp | 1856149 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 646359845 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003239788 |
|---|
| Protein GI | 260893691 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAC CTAACCTGGA AGATTACGAA GAAGTCTGCC GTACCTTTAC CTGGGAACAG
GCGGAGGAGG AGTTGGGGGT AAAGAACTCT TCCCGCATCA ACCTGGCCGC CTTAGCCGTA
GATCAGCCCT GCCGGGAAGG GAAAGGAGAC AGGATAGCCC TCCGCTTCTG GGACGGGGTG
AAGGAGTGCT CTTTTACCTT TGCGGAACTT AAAGGCCTTT CCGACCGCTT TGCCCTGGTT
TTGGAGAAGT TGGGCGTGGA GCCTGGTGAC CGGGTAGCCC TTTTCGGCCC CCCTGCTCCT
GAGCTTTACG CTAGTTTCCT GGGTATAATC AAGCGCGGGG CCATAGCCGT TCCCTTGTTC
GAAGGGTATA TGCCGGAGGC GCTCGCTGAG TTTCTGCGGG AAGCAGAAGC CAAAGTACTG
GTGACCTCCG CTCCCGGGCG CCTTAAGTTC GACTGGCGTT CGGTTCCTGA ACTCAAGTAC
ATCCTGGTGG TGGGCCTGGT AGAAGCGCGG GAAGCCGGAG GGGTCATAAG TTGGTACCGG
GCGGTGGGGG AAGCGGTAGG CGAGCCGAAG GTAGTGCCTT TGCCCAAGGA AGCTCCTTTC
GTTCTCCTCT TTACCTCCGG CTCCACGGGG AAGCCTAAGG GGATACTGCT TCCCCACCGA
GCGGCGGTGC AGTACTACCA GACGGGCAAG TGGGTGCTTG ACCTCAAAGA AAACGACGTT
TACTGGTGCA CGGCCGGGCT CAGCTGGGTC ACCGGGGTGG CCTACGGGGT GCTGGCCCCT
TGGCTTAACC GCGTGACCAC TGTGATCTAC GGCGGCGAGC TCGAGCCGGA GAACTTTTAC
GAGACCTTCC GGCGCTTTGG CGTGACGGTC TGGTACACCA CCCCTATGAT CTTGAGGACT
TTGATGGCGG CGGAGAAGGT CCTACCGCCG GTGAGCCACC GTTTGCGCCA TATCCTCACC
GTCGGCGAGG CTTTAAACCC GGCGCTTGTC CGCTGGAGCC GCACGGTTTT CGGCGTAGAG
GTTTACGATA CTTGGTTCAT GACCGAGACG GGAGGACACA TGATAGCTAA TTTCCGTTGT
CTGCCGGTCA AGGCAGGTTC GATGGGGAAG CCCGTACCCG GGGTAAAGGT AGCGGTGCTG
GACCCCCAGG GGAAGGAGCT TGGCCCTTAC GAAATAGGGC AGTTGGCCCT GCTTCCTCCC
TGGCCGGCCA TGTTTCAGGG CGTATGGCGC GACGAGGCTA GATACCAGGA ATATTTTCGC
CTTGCACCCT GGTATCTCAC AGGCGATTTA GTATACCGCG ACAAAGAAGG TTACTACTGG
TATCAAGGAA GGGTGGACGA TCTCATCAAA GTAGGGGAGA AGCGTGTGGG ACCTTGCGAG
ATAGAAAGCA AGCTTCTGGA GCACCCGGCG GTGCTGGAGG CAGGGGTCAT CGGTAAGCCT
GACTTCTGGC GGGGGGAGAT CGTCAAAGCC TTTATCGTGC TGCGGCCGGG CTACCAGTGG
AGCGCTAAAT TGCAGGCGGA GCTCACCCGG TTCATCCGCA CCCGCCTGGC GGATTACCTG
GTGCCGCAGG AGTTTGAGGT CTTACCGCAG CTCCCCCGAA CGCCCAACGG CAAGCTTTTG
CGCAGGGTGC TCAAGGCGTG GGATATGGGG CTTCCTTGTG ATGATGGAAC TGGGAGGGGT
GAAGCGTGGA AGAGCGGTCG ATAG
|
|---|
| Protein sequence | MLRPNLEDYE EVCRTFTWEQ AEEELGVKNS SRINLAALAV DQPCREGKGD RIALRFWDGV
KECSFTFAEL KGLSDRFALV LEKLGVEPGD RVALFGPPAP ELYASFLGII KRGAIAVPLF
EGYMPEALAE FLREAEAKVL VTSAPGRLKF DWRSVPELKY ILVVGLVEAR EAGGVISWYR
AVGEAVGEPK VVPLPKEAPF VLLFTSGSTG KPKGILLPHR AAVQYYQTGK WVLDLKENDV
YWCTAGLSWV TGVAYGVLAP WLNRVTTVIY GGELEPENFY ETFRRFGVTV WYTTPMILRT
LMAAEKVLPP VSHRLRHILT VGEALNPALV RWSRTVFGVE VYDTWFMTET GGHMIANFRC
LPVKAGSMGK PVPGVKVAVL DPQGKELGPY EIGQLALLPP WPAMFQGVWR DEARYQEYFR
LAPWYLTGDL VYRDKEGYYW YQGRVDDLIK VGEKRVGPCE IESKLLEHPA VLEAGVIGKP
DFWRGEIVKA FIVLRPGYQW SAKLQAELTR FIRTRLADYL VPQEFEVLPQ LPRTPNGKLL
RRVLKAWDMG LPCDDGTGRG EAWKSGR
|
|---|
| |